Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g03592 ATGGTGACATTTTCCGTTGGTGGCTGCGACGACGGTGAAGGACCTAGCAACCCAAATCAGAAGCGTCGAAGGGTCGACGCCGGCGAAGAAGTCATAGCAGCAACAACTACAAGAGAAGAAGAAGAAGAAGAAAATCAACAACGTCAAGAAGGGTTTGAAATGGAAAATCCCCCAATTGGAACCCTAGAAAATGATGCAAATGAAGGAAATTCGGTTGGATCCAACGCGGGACAACAGAATAATGATCTGAGTAAGAAGGTTTCTGCTATCATTTCTGATCCTGATGTTCTTGATTGCTTCATTTGCTCTGAACCGTTGGCAGTTCCTATTTATCAGTGTGAGAATGGGCATATTGCTTGCTCTAAATGTTGTGGCGAACTTAGGAACAAATGTCCTATGTGCTCAATGCCCATTGGGTACAATCGTTGTCGGGCTGTGGAGAAGTTGCTGGAATCTATTAAAATATCATGCCCAAATGCAAAATATGGCTGCAAAGATATGTTTAGTTGCAGTATGAAAAGTAGCCACGAGAAGGAATGCATATATATACCATGTAAATGCCCACATACAGGCTGCGGTTTTCTTGCCTCATCCAAGGAGTTAGCTCTCCACTTCAGCCATAGACATGTAGGCTTTGGAATACAGTTTTCCTATGACAAATTTATTTCTGTCTCCTTAAATACCCGACAGAAACAAATCGTTCTTCTAGATCAAAATGACGCAAGATTGTTTATTGTTCACAACCACATTGTTCAACACGGAAATATGGTCCATATTAGTTGCATGGGCCCCAAAGCAATTACAGATACTCATTATGATGTCTTGGCTAGGTCTCAAGGGAGCACATTAATATTGCAATCTTCTATGAAGACCATTCAAGACAATAATGGTGATGCTCCTACAGCTGGATTTCTTGTGATACCTTCAGATCATTTTGGTTTTGGACAACTCAAATTGGATATTCGTATAAAGTCTCACTAA 981 0.4098 MVTFSVGGCDDGEGPSNPNQKRRRVDAGEEVIAATTTREEEEEENQQRQEGFEMENPPIGTLENDANEGNSVGSNAGQQNNDLSKKVSAIISDPDVLDCFICSEPLAVPIYQCENGHIACSKCCGELRNKCPMCSMPIGYNRCRAVEKLLESIKISCPNAKYGCKDMFSCSMKSSHEKECIYIPCKCPHTGCGFLASSKELALHFSHRHVGFGIQFSYDKFISVSLNTRQKQIVLLDQNDARLFIVHNHIVQHGNMVHISCMGPKAITDTHYDVLARSQGSTLILQSSMKTIQDNNGDAPTAGFLVIPSDHFGFGQLKLDIRIKSH 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g03592 326 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 147 205 IPR013083 -
Mepo2g03592 326 MobiDBLite consensus disorder prediction 16 45 - -
Mepo2g03592 326 SUPERFAMILY RING/U-box 98 141 - -
Mepo2g03592 326 MobiDBLite consensus disorder prediction 1 80 - -
Mepo2g03592 326 SUPERFAMILY TRAF domain-like 152 323 - -
Mepo2g03592 326 Pfam Seven in absentia protein family 142 299 IPR018121 GO:0005737|GO:0006511|GO:0007275
Mepo2g03592 326 ProSiteProfiles Zinc finger SIAH-type profile. 152 210 IPR013010 GO:0008270
Mepo2g03592 326 PANTHER E3 UBIQUITIN-PROTEIN LIGASE SINA-LIKE 4 36 325 IPR044286 -
Mepo2g03592 326 CDD RING-HC_SIAHs 97 135 - -
Mepo2g03592 326 MobiDBLite consensus disorder prediction 63 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g03592 Mepo-Chr2 45286102 45288823 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g03592 58 280 C3H Transcription Factor Family AT2G41980 26.642 1.00e-19 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g03592 K04506 - gmx:100797881 390.578