Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g03577 ATGGGTAGAGAAGAAGAATCCAAAAAGATGGAAATTGATCTCTCTTTGAAGATAGATAGTGATGATGAGCGAGAAGAAGAAGAAGTAGATCGTGAGCTTGTTAAAGAGGATGATGAGAAGGAAGAAGTACATGAAGCTACAGCTGGTGAAATAGAAGATGATGCTTCAGTTATACAACTATCTTTGCAAGATGACACGAAAATAAAACAGTTAAGTGCCTTAGAAATGGAGATGGAAAATATGAAAGAAGAAAACAAAGCATTGAGGAAAGTGGTGGAACAAACAATGAAAGACTACTATGATCTACAAACAAAATTTTCAGTCATCCAAGAAAATAATAATAAAAGAAAGGATCGTCAACTTTCTCTCTCACTACAAGACAATAATGCAACTACAAGTGGTGAAGGACCATCAAGATCAATTCATGAGATCTTTAGTCAAAAAATTCAAAGAACTCCATCTCCATTACCACCAAACAATATTACTGATGATGATAGTATAAGTGAGAGTGATTTGGGTTTGTCATTGAGGATGCAGACAATAAGCACGTGTCAGAGAGATACTGAGGGAAATAAAGAAGGCAAAAAAGAACAATTGGGAAGTTTTGAATCAGTGCAGAATAAAATGCAAAGGGTACATGAGGTGCCTAGTGTTACTACTACTCATGCTGCTTATTCCCCTCCTAATAGAAAGGCTAGGGTTTCTGTTAGAGCAAGATGTGAAACTGCCACAATGAATGATGGGTGCCAATGGAGAAAATATGGACAGAAAATAGCAAAAGGAAATCCATGTCCACGTGCCTACTATCGTTGTACTGTTGCTCCAGGCTGTCCAGTTAGGAAACAAGTGCAAAGATGTATTGATGACATGTCTATACTAATTACAACATATGAAGGAACACATAACCATCCACTACCTGTTGGTGCAACTGCAATGGCATCAACAGCTTCAGCAGCAGCTTCATTTATGTTACTAGATTCAAGCAATCCTAATATTTCAGATTATGGTTTCACAACTCAACAATCCTTTAATCCTTACACTAATAATAGCTTTCACCACCCATTAAACCAATCTTCAAATATTAGAAGCATCAACCCCAATGATCCATCCCAAGGAATTGTTTTTGACCTTACCAATAATAATAGTAATGAACTCAACGAACAACGACGATTTTCTACTGCAGGTAGCTCCAGCTCCAATATTTCAACTGATCAACCTCGTTTTTCTTGGATGCAAAACAGATACCAACAGCAGAGTAGTACTAGCAATGCTAATATTGCAATGAACAATTTTCATAACCCTAGAGTACCACTGGATATTCATGATAGGGTTTGGAAAGGATCAGAAGAAAATAATAACAACAATGTGTCTGCAATTGCATCAGATCCTAAGTTTAGGCTTGCTGTTGCAGCTGCAATTTCATCACTCATGAATAAAGAAAGCAACAACACTACTACTCATGGTAGCAACAATTGA 1476 0.3699 MGREEESKKMEIDLSLKIDSDDEREEEEVDRELVKEDDEKEEVHEATAGEIEDDASVIQLSLQDDTKIKQLSALEMEMENMKEENKALRKVVEQTMKDYYDLQTKFSVIQENNNKRKDRQLSLSLQDNNATTSGEGPSRSIHEIFSQKIQRTPSPLPPNNITDDDSISESDLGLSLRMQTISTCQRDTEGNKEGKKEQLGSFESVQNKMQRVHEVPSVTTTHAAYSPPNRKARVSVRARCETATMNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPGCPVRKQVQRCIDDMSILITTYEGTHNHPLPVGATAMASTASAAASFMLLDSSNPNISDYGFTTQQSFNPYTNNSFHHPLNQSSNIRSINPNDPSQGIVFDLTNNNSNELNEQRRFSTAGSSSSNISTDQPRFSWMQNRYQQQSSTSNANIAMNNFHNPRVPLDIHDRVWKGSEENNNNNVSAIASDPKFRLAVAAAISSLMNKESNNTTTHGSNN 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g03577 491 ProSiteProfiles WRKY domain profile. 240 306 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo2g03577 491 Gene3D WRKY domain 230 307 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo2g03577 491 MobiDBLite consensus disorder prediction 123 140 - -
Mepo2g03577 491 Coils Coil 64 98 - -
Mepo2g03577 491 Pfam WRKY DNA -binding domain 246 304 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo2g03577 491 FunFam probable WRKY transcription factor 31 230 307 - -
Mepo2g03577 491 MobiDBLite consensus disorder prediction 1 19 - -
Mepo2g03577 491 MobiDBLite consensus disorder prediction 20 35 - -
Mepo2g03577 491 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 45 483 IPR044810 GO:0003700
Mepo2g03577 491 SMART WRKY_cls 245 305 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo2g03577 491 SUPERFAMILY WRKY DNA-binding domain 238 306 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo2g03577 491 MobiDBLite consensus disorder prediction 1 45 - -
Mepo2g03577 491 MobiDBLite consensus disorder prediction 119 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g03577 Mepo-Chr2 45185598 45188259 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g03577 35 386 WRKY Transcription Factor Family AT1G68150 45.479 2.47e-82 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mepo2g03577 WRKY 1.6e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g03577 - - gmx:100820209 564.303