Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g03571 ATGGGGATTTTCACTTTCTGTGGTGTGAAAGGTAAAGAAACTGCGGCGAGAGCAGAGCATTATATAAAGCCAGAAGCACTGCATCAAACAAACCCTCACACTCAAACCATTTCTTCCCCTCTCATACTACTGCGGCTGTTGAATCAGGAAAACATGTCTCACAGGAAATTCGAGCATCCTCGTCACGGTTCTCTTGGATTTCTCCCCAGGAAGCGTGCTGCTCGTCATCGCGGAAAAGTGAAAGCTTTCCCAAAAGACGATCCTACCAAACAATGCAGGTTGACTGCTTTTGTGGGTTACAAGTCTGGGATGACCCATATAGTTAGGGAGGTGGAGAAACCTGGATCAAAACTTCATAAGAAAGAGACATGTGAAGCTGTCACTATCATTGAAACTCCCCCAATTGTTGTTGTTGGAGTGGTAGGATATGTGAAGACTCCACGAGGCCTTCGCACACTCAATACTGTTTGGGCTCAGCATCTCAGTGAAGATGTCAAACGACGATTCTACAAGAACTGGGCCAAATCAAAGAAGAAGGCTTTTACCAAGTATACCAAAAAATATGAAACTGATGAAGGAAAGAAAGATATTCAAACTCAGCTGGAGAAACTGAAGAAGTATGCCACTGTTATTCGTGTTCTTGCTCATACTCAGGTAAGGAAGTTGAAGGGTCTGAAACAAAAAAAAGCTCATTTGATGGAAATCCAAGTGAATGGTGGAACAGTAAGCCAGAAGGTGGACTATGCATACAATTTCTTTGAAAAGCAAATCCCAGTTGATGCAGTTTTCCAAAAAGATGAGATGATTGATATCATTGGAGTAACTAAAGGTAAAGGTTACGAAGGTGTTGTAACTCGTTGGGGCGTCACTCGGCTTCCACGAAAGACTCACAGAGGTCTTAGGAAGGTTGCTTGTATTGGTGCCTGGCACCCTGCCCGTGTTTCATTCACAGTTGCCAGGGCTGGTCAGAATGGATATCATCATCGTACTGAGCTGAATAAGAAGATCTACAAGGTTGGCAAGCAGGACCAAGAGTCACATACAGCCATCACTGAATTTGACAGGACTGAGAAGGATATTACTCCTATGGGTGGATTCCCTCATTATGGTGTGGTGAATCATGATTATCTTATGATCAAGGGAGGCTGTGTTGGACCAAAGAAGCGTGTTGTCACTCTTCGTCAGTCACTACTCAAGCAGACCTCTCGATTGGCTCTTGAGGACATTAAACTGAAGTTCATTGACACTTCTTCCAAGTTTGGACATGGCCGATTCCAGACTACTCAGGAGAAACAGAAGTTTTATGGTCGTTTGAAAGCTTAA 1323 0.4369 MGIFTFCGVKGKETAARAEHYIKPEALHQTNPHTQTISSPLILLRLLNQENMSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPTKQCRLTAFVGYKSGMTHIVREVEKPGSKLHKKETCEAVTIIETPPIVVVGVVGYVKTPRGLRTLNTVWAQHLSEDVKRRFYKNWAKSKKKAFTKYTKKYETDEGKKDIQTQLEKLKKYATVIRVLAHTQVRKLKGLKQKKAHLMEIQVNGGTVSQKVDYAYNFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKIYKVGKQDQESHTAITEFDRTEKDITPMGGFPHYGVVNHDYLMIKGGCVGPKKRVVTLRQSLLKQTSRLALEDIKLKFIDTSSKFGHGRFQTTQEKQKFYGRLKA 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g03571 440 ProSitePatterns Ribosomal protein L3 signature. 263 286 IPR019926 -
Mepo2g03571 440 FunFam 60S ribosomal protein L3 95 203 - -
Mepo2g03571 440 FunFam 60S ribosomal protein L3 134 258 - -
Mepo2g03571 440 FunFam 60S ribosomal protein L3 52 128 - -
Mepo2g03571 440 Pfam Ribosomal protein L3 52 421 IPR000597 GO:0003735|GO:0005840|GO:0006412
Mepo2g03571 440 PANTHER 60S RIBOSOMAL PROTEIN L3-RELATED 52 435 IPR045077 GO:0003735|GO:0005840|GO:0006412
Mepo2g03571 440 FunFam Ribosomal protein L3 316 440 - -
Mepo2g03571 440 FunFam 60S ribosomal protein L3 277 325 - -
Mepo2g03571 440 Gene3D Translation factors 95 436 - -
Mepo2g03571 440 SUPERFAMILY Translation proteins 55 421 IPR009000 -
Mepo2g03571 440 Gene3D Ribosomal protein L3, domain 3 52 325 IPR044892 -
Mepo2g03571 440 Gene3D - 134 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g03571 Mepo-Chr2 45127579 45133228 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g03571 52 437 Cytoplasmic Ribosomal Protein Gene Family AT1G61580 85.492 0.0 689
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g03571 K02925 - gmx:100792174 704.516