Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g03535 ATGGTAGATAATAATAATAACAATGTTAATCTTCCACCCGGGTTTAGATTTTATCCCACAGATGAAGAGCTTGTGGTCCATTTTCTTCATAGAAAGGCTTCCCTTTTACCTTGTCATCCAGATGTTATCCCTGATCTTGACCTCTATCCATTTGATCCATGGCAACTTCAAGGTAGAGCTTTGGAAGAGGGAAATCAATGGTACTATTATAGTAGAAGGACACAAAATAGAATGACTAACAATGGTTATTGGATGCCAATGGGAATGGAAGAACAAGTTGTTACAAGCTCAAGCAATAAGAGAGTTGGTATGAAGAAATATTATGTGTTCCATATTGGAGAAGCACCTAATGGTAACCAAACCAATTGGATAATGCAAGAGTATCGTCTATCAGATTCTGCTTCTTCCTCTAGCAGACCATCATCCAAAAGAAAATCACAACCGAAATCATGGGTGATATGTCGAGTTTATGAGCGTGATGAAGATGACCAAGATGGAGATGGAACGGAGCTATCTTGTTTGGATGAAGTTTTCTTGTCATTGGATGATCTTGATGAAGTAAGCTTGCCAAATTAG 576 0.3819 MVDNNNNNVNLPPGFRFYPTDEELVVHFLHRKASLLPCHPDVIPDLDLYPFDPWQLQGRALEEGNQWYYYSRRTQNRMTNNGYWMPMGMEEQVVTSSSNKRVGMKKYYVFHIGEAPNGNQTNWIMQEYRLSDSASSSSRPSSKRKSQPKSWVICRVYERDEDDQDGDGTELSCLDEVFLSLDDLDEVSLPN 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g03535 191 Gene3D NAC domain 20 163 IPR036093 GO:0003677|GO:0006355
Mepo2g03535 191 PANTHER NAC TRANSCRIPTION FACTOR 56 11 164 - -
Mepo2g03535 191 ProSiteProfiles NAC domain profile. 11 159 IPR003441 GO:0003677|GO:0006355
Mepo2g03535 191 FunFam NAC domain-containing protein 104 20 162 - -
Mepo2g03535 191 SUPERFAMILY NAC domain 7 158 IPR036093 GO:0003677|GO:0006355
Mepo2g03535 191 Pfam No apical meristem (NAM) protein 12 130 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g03535 Mepo-Chr2 44893397 44894587 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g03535 10 160 NAC Transcription Factor Family AT1G61110 42.424 1.64e-41 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mepo2g03535 NAM 4.4e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g03535 - - gmx:100788893 327.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g03535 2 44893397 44894587 Mepo2g03535 2 44893397 44894587 ECH