Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g03526 ATGAATGCTTCATCCTTAACCTCAAGCCTAAGCATTTCAAATTCAAATCAATTTCATCACCTTCGACAACTCTCTATTAAACAGCAAAGACCTTGTCACGTGCACTTTGCAACAATTTCATGTAGAGCAACAAAGCTAGTGGAAGAAACCAAGAATGGATCAAATTTCTACAAGATGTTATCGGTGAATCCGAAAAGCGCAACAATGGAAGAAATAAAGAGAGCCTATAGATCAATGGCACTTCAGTATCATCCTGATGTGTGTCATGATCCTTCCATGAAAGAGGAATCAACTAAAAATTTTGTTGGGTTAAATGCAGCTTATGAAACTTTGTCAAATCCTATGCTTCGTGAACAATATGATAGTGAATTGGGTTTGAGAAACAACATGATGAATAATAATAATATTGTAAATGATGAGATATGGAGAAGTAGGTGGCAAGAACAAGTTGTTGAGTTGAAGAAAAGGTCTAATAGACGTATGGGACAAAAAGGAAGGTCTTGGGGTAGCAGAATGAGGACTCAAAGCATGAAAGATCGGAACTAA 546 0.3663 MNASSLTSSLSISNSNQFHHLRQLSIKQQRPCHVHFATISCRATKLVEETKNGSNFYKMLSVNPKSATMEEIKRAYRSMALQYHPDVCHDPSMKEESTKNFVGLNAAYETLSNPMLREQYDSELGLRNNMMNNNNIVNDEIWRSRWQEQVVELKKRSNRRMGQKGRSWGSRMRTQSMKDRN 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g03526 181 CDD DnaJ 55 113 IPR001623 -
Mepo2g03526 181 Gene3D DnaJ domain 43 149 IPR036869 -
Mepo2g03526 181 Pfam DnaJ domain 55 121 IPR001623 -
Mepo2g03526 181 SUPERFAMILY Chaperone J-domain 18 120 IPR036869 -
Mepo2g03526 181 ProSitePatterns Nt-dnaJ domain signature. 101 120 IPR018253 -
Mepo2g03526 181 PRINTS DnaJ domain signature 96 116 IPR001623 -
Mepo2g03526 181 PRINTS DnaJ domain signature 76 91 IPR001623 -
Mepo2g03526 181 PRINTS DnaJ domain signature 58 76 IPR001623 -
Mepo2g03526 181 ProSiteProfiles dnaJ domain profile. 55 124 IPR001623 -
Mepo2g03526 181 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 12 179 - -
Mepo2g03526 181 MobiDBLite consensus disorder prediction 154 181 - -
Mepo2g03526 181 SMART dnaj_3 54 116 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g03526 Mepo-Chr2 44793430 44794230 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g03526 57 122 C2H2 Transcription Factor Family AT1G74250 41.176 1.05e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g03526 - - gmx:100811478 204.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g03526 2 44793430 44794230 Mepo6g00167 6 1714744 1715399 PCT