Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g03512 ATGTCTCACTTCGGTAGGTCAGGTCCTCCGGACATCTCTGATACCTACTCTCTTCTCGTTCTCAACATCACCTTCCGTACCACCGCTGATGACCTATTTCCTCTCTTTGACAAGTATGGCAAGGTTGTTGACATCTTCATCCCCAAAGATCGAAGGACTGGTGAATCGAGAGGTTTTGCTTTTGTGCGTTACAAATATGCTGATGAAGCTTCCAAGGCTGTTGATAGGCTCGATGGAAGAATGGTTGATGGTCGTGAAATAACTGTTCAGTTTGCAAAATATGGCCCTAATGCTGAGAGGATTCAGAAAGGAAGGATTATCGAAACATCCCCGAGATCAAAGAGCTCAAGGAGCCGCAGTCCCAGCAAGAGAAGGCATCGTGATGACTACAAAGAAAAGGATTACAGGAGGAGAAGTCGCAGCAGGAGTTATGATAGGCATGAACGTGACAGGCACCGTGGGAGAGATAGGGACCATCGTCGCCGAAGCAGAAGCCGTAGTGCTAGTCCTGGTTACAAGGGTCGTGGAAGGGGGCGCCATGACGATGAGCGTCGTAGTAGAAGCCGAAGCAGATCAGTGGACAGCCGCTCCCCTGTGCGACACAGTTCTATTCCTAAAAGGAGCCCTTCTCCAAGGAGGAGCCCATCTCCAAAGAGGAGCCCATCCCCAAAGAGGAGCCCTTCTCCAAAGAGGAGCCCTTCTCTAAAGAGGAGCATTTCCCCCCAAAAGAGTGTTTCCCCCAGGAAAAGTCCACTCCGTGAAAGTCCTGATAATCGTAGCCATGGTGGAAGGTCTCTTACGCCTCGCAGTGTGTCACCACGAGGCCGTCCTGGTGCTTCTCGAAGCCCCTCTCCTCGAAATTCAAATGGTGATGAATAA 879 0.5063 MSHFGRSGPPDISDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPKDRRTGESRGFAFVRYKYADEASKAVDRLDGRMVDGREITVQFAKYGPNAERIQKGRIIETSPRSKSSRSRSPSKRRHRDDYKEKDYRRRSRSRSYDRHERDRHRGRDRDHRRRSRSRSASPGYKGRGRGRHDDERRSRSRSRSVDSRSPVRHSSIPKRSPSPRRSPSPKRSPSPKRSPSPKRSPSLKRSISPQKSVSPRKSPLRESPDNRSHGGRSLTPRSVSPRGRPGASRSPSPRNSNGDE 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g03512 292 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 18 88 IPR000504 GO:0003723
Mepo2g03512 292 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 16 94 IPR000504 GO:0003723
Mepo2g03512 292 SMART rrm1_1 17 90 IPR000504 GO:0003723
Mepo2g03512 292 SUPERFAMILY RNA-binding domain, RBD 8 102 IPR035979 GO:0003676
Mepo2g03512 292 MobiDBLite consensus disorder prediction 100 292 - -
Mepo2g03512 292 Gene3D - 4 104 IPR012677 -
Mepo2g03512 292 MobiDBLite consensus disorder prediction 174 196 - -
Mepo2g03512 292 PANTHER GLYCINE-RICH RNA-BINDING PROTEIN RZ1A 14 246 - -
Mepo2g03512 292 MobiDBLite consensus disorder prediction 122 152 - -
Mepo2g03512 292 MobiDBLite consensus disorder prediction 210 228 - -
Mepo2g03512 292 CDD RRM_SRSF2_SRSF8 18 90 - -
Mepo2g03512 292 MobiDBLite consensus disorder prediction 153 168 - -
Mepo2g03512 292 MobiDBLite consensus disorder prediction 232 249 - -
Mepo2g03512 292 FunFam Serine/arginine-rich splicing factor SC35 4 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g03512 Mepo-Chr2 44701943 44704891 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g03512 13 92 Eukaryotic Initiation Factors Gene Family AT3G11400 33.750 3.73e-09 55.1