Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g03486 ATGGGACTTCATCACAGAAAACTCTTATCTAAATCTGAATGTGAACGCATCTGTGATGAGGGTGATGAGGATTGCCTCAAAGACTGCTATGCCTACAACCCTCCACCACCACCATCTTCTAATCACACCAAACACAAAACCACCACTTACTTGATCATAAGTTTTTCTATTGTAGCAGCTATTTTCCTTGTTCTGTGCTGCTATGCCTTCTATGTCAAGTTTTTCTCCCGTAGGAACAGGTCAAGAAGAAGAACCTTACTAACAAGGCAACAAACAGAACATGGTTTTGTTGTTGGTGAGGAACATGAAGATGGTTCTGTTGTAGACCATCCCATATGGTATATTCGAACTCCTGGTCTTCAACAATCAATTATTAATGCAATCACTGTTGTTAAGTATAAGAAAGATGAAGGTTTGATTGATGGATCAGATTGTTCTGTTTGTTTGAGTGAGTTTGAAGAAGATGAGAATCTTAGACTTTTGCCAAAGTGTAACCATGCTTTTCATTTACCTTGTATTGATACTTGGCTTAGATCACACATTAATTGTCCTATGTGTAGGGCTCCTATTGTTGTTGACCCTTTAAGGGTTCCATCTATGGAGCCTAATGTTTTTGTGGAAAGTTCTCAGATCGAGGTTTTGGAAAATAGCGATGGAAATGGAGATAGTGTTGTTGGTCAATTGAGAAATGGAGAAGAGGAAGAAGGGGAAGAGGTTGAGGAAAATGGAAGAAGGGTTTGTGAAGATGAGAGTTCAGCTTTGGAGATGGTAAATATGCAACCAAGAAGATCAGTTTCTCTTGATTCTTCTGCTGCTGCTAAGATCAATCTTGCTCTTTCCAAGTTTCTATCAGTGGAATCTCAAAGGAATTCTAATAGGGAGCAGGTAGGGGAAGTCAATGAACAAATTGTTTCAAAGAAGGTTGGTGAAAATGGGAATATGGTAAATATGCATAGTGCTCCTTGTTCAATGAATAGGTCAAGATCCTTCAATGGTAAACATCTACTATCCTTGTATAGTAGCAGTCAGAAGAAGAAAAATGCTCCACCAAGAAGCTTTTGA 1062 0.3879 MGLHHRKLLSKSECERICDEGDEDCLKDCYAYNPPPPPSSNHTKHKTTTYLIISFSIVAAIFLVLCCYAFYVKFFSRRNRSRRRTLLTRQQTEHGFVVGEEHEDGSVVDHPIWYIRTPGLQQSIINAITVVKYKKDEGLIDGSDCSVCLSEFEEDENLRLLPKCNHAFHLPCIDTWLRSHINCPMCRAPIVVDPLRVPSMEPNVFVESSQIEVLENSDGNGDSVVGQLRNGEEEEGEEVEENGRRVCEDESSALEMVNMQPRRSVSLDSSAAAKINLALSKFLSVESQRNSNREQVGEVNEQIVSKKVGENGNMVNMHSAPCSMNRSRSFNGKHLLSLYSSSQKKKNAPPRSF 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g03486 353 CDD RING-H2_EL5-like 144 187 - -
Mepo2g03486 353 SMART ring_2 145 186 IPR001841 -
Mepo2g03486 353 FunFam RING-H2 finger protein ATL54 120 193 - -
Mepo2g03486 353 SUPERFAMILY RING/U-box 135 193 - -
Mepo2g03486 353 Pfam Ring finger domain 144 187 IPR001841 -
Mepo2g03486 353 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 39 193 IPR044675 -
Mepo2g03486 353 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 120 193 IPR013083 -
Mepo2g03486 353 ProSiteProfiles Zinc finger RING-type profile. 145 187 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g03486 Mepo-Chr2 44441717 44443286 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g03486 55 246 C3H Transcription Factor Family AT1G72220 44.845 5.20e-47 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g03486 - - mtr:11411830 617.076