Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g03478 ATGGAGGGTGGAAACAGAGCTGAAGCTGAACGCTGGCTATACACCGCAAACAAACTCCTAAGCGCACGTGATCTGCACGGTGCACGCTCCTTCGCGATCCGTGCCCGAGAATCCGACCCAACCTTCGACGCCTCTGAGCTTCTCTTAGCTGTCATCGACACTCTCCTCGCCGGAGAATCTCGGATCAACGATCACCACCGTGATTGGTACGGAATTCTTCAAATTCTCCGATACACCACCAACATCGACCACATCGCGAATCAGTATCGCCGACTTGCTCTTCTCCTTGACCCTAATCGGAACCCATTCGCTTTCTCCGGTCACGCTTTCTCCCTTGTTCATGATGCTTGGTCTGTTCTCTCAAATCCTGCTAAGAAAGCTATGTATGATAGTGATCTACGGTTGCTCACTACACCACCTGTTCCGCCACAGCCTCAGCCGCAACCGGCTCCTCAGTATCAGCAGCCTCCACAGCAGCCACTGCAACAGCCTCCACAGACAAATCCAACGCCGAGGAAAAACTCTAGATCGAGGGATGGCACTGGCGCCACCGCCACCGAGCCGACACCTTCTCGACAGAATCGGAACCCTAGCGAGGTAAGTGAGACGACTCGGCAGACGCGAACAGCGAGTGCTGCTGAAACGGAAGGTAACGTAAGCTTCTGGACATTGTGCCCTTACTGTTACGTTTACTATGAGTATCCAAAGGGGTACGAAGATTGTACCTTACGGTGTCAGAGTTGTCGGAGGGGGTTTCATGCGGTGGTGATACGTTCACCGCAGGTGAATGAGATAGATTCTTCGTTTTGTACTTGGGGATTTTTTCCATTAGGGTTTTCTGGTGATTCTAAAGATGTGAATGGTGCTTCTTCCAATTGGAACCCTATTGCACCTTTGTTTCCGTGTTCCATGAAAGGATCGTCTAATAGGAAAAAGAATTGGGTTTATTATGATGAAGAGGCAACTGCGGCTTTTATTGATATTTCTGATCCGAGTGATAATGATTCTGATGATGGGGATTGGAGGGGTGGTGCTGGTAAGAACAGAGGGGTGAAGAGGTCAGGGGTTAGTACTAGTAAAAAGATTAGGAAAGATTCCGGTAATGCTAGTGGTAGGGGAGCTGTTGGGAGACCTCGGAGGAGTGCTACTGGTGCTGCATCTGGGAATGAGAAGAATGTTGGGGCTGTTGATGATGCTGCTACTGCTGCTAGTGGTGTAAGGGCAGATACTAGTACTATTAAGAAAGCTGCACTGGGTAGTTCCAGGAGGAGAGGTGCTGGAAACTTGGATTTGAATGTGGAGTTCAGTAATGATGTGGAGGAGCCGTCCCGTGGAGTGCGTGCCCGTGAAGGGAATGCAACTGGCAATGCCGAGGATAATATTGATGGGGTTGGGTTTTTTGAGGGTCTTGATGAGTTCCTCAGTAGCTTACCCATTCTCAATCCGGTGGGAGATGATAAGGTTAAGGGTCATTAG 1476 0.4986 MEGGNRAEAERWLYTANKLLSARDLHGARSFAIRARESDPTFDASELLLAVIDTLLAGESRINDHHRDWYGILQILRYTTNIDHIANQYRRLALLLDPNRNPFAFSGHAFSLVHDAWSVLSNPAKKAMYDSDLRLLTTPPVPPQPQPQPAPQYQQPPQQPLQQPPQTNPTPRKNSRSRDGTGATATEPTPSRQNRNPSEVSETTRQTRTASAAETEGNVSFWTLCPYCYVYYEYPKGYEDCTLRCQSCRRGFHAVVIRSPQVNEIDSSFCTWGFFPLGFSGDSKDVNGASSNWNPIAPLFPCSMKGSSNRKKNWVYYDEEATAAFIDISDPSDNDSDDGDWRGGAGKNRGVKRSGVSTSKKIRKDSGNASGRGAVGRPRRSATGAASGNEKNVGAVDDAATAASGVRADTSTIKKAALGSSRRRGAGNLDLNVEFSNDVEEPSRGVRAREGNATGNAEDNIDGVGFFEGLDEFLSSLPILNPVGDDKVKGH 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g03478 491 Gene3D DnaJ domain 57 138 IPR036869 -
Mepo2g03478 491 Pfam DnaJ domain 68 130 IPR001623 -
Mepo2g03478 491 SUPERFAMILY C-type lectin-like 226 326 IPR016187 -
Mepo2g03478 491 ProSitePatterns Nt-dnaJ domain signature. 110 129 IPR018253 -
Mepo2g03478 491 SMART dnaj_3 67 125 IPR001623 -
Mepo2g03478 491 MobiDBLite consensus disorder prediction 168 213 - -
Mepo2g03478 491 SUPERFAMILY Chaperone J-domain 64 133 IPR036869 -
Mepo2g03478 491 MobiDBLite consensus disorder prediction 328 391 - -
Mepo2g03478 491 MobiDBLite consensus disorder prediction 138 167 - -
Mepo2g03478 491 ProSiteProfiles dnaJ domain profile. 68 133 IPR001623 -
Mepo2g03478 491 CDD DnaJ 68 122 IPR001623 -
Mepo2g03478 491 MobiDBLite consensus disorder prediction 135 213 - -
Mepo2g03478 491 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g03478 Mepo-Chr2 44398004 44400039 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g03478 8 490 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 39.157 4.36e-99 304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g03478 - - cam:101509006 723.776
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g03478 2 44398004 44400039 Mepo6g00224 6 2179698 2181704 PCT