Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g03452 ATGAGGGAGCTTCTTGTGCAGACAAATGCAGAAAGGATCCAAACAGAACACAAAGACATGAAAGATTTGGAGGCTGTTGAGAAAAAAGAAATTCATGAAACCAAGCAGGATATTCCTGTCATACCTAAAATTGGGCCAAGTCAAATTGGATCGTCAGCCACAATGGAAACCAAAGGAACAGCAGAGGGGGACATGGCTGGCGGAGAGGTTCCTCAAAGTTCTTCTACACTGAAGGATGTGCAGAAAGACTGGACTTGTGCTTTAGGTTTGGTAACAACATCGAGCGAGGAAATCTTGAATTCCCACTTCAGTGGAGGGAAACACGGGGCTGCTCTGCAGAAGCAAAAGGATGCAGAAGCGATAAATGAAATCACAGCTACTGATAATAAAGAAATAGTAAAGGTGACAAATGGAGAAAGACTCCAAACAGAACACAAAGACATCAAAGATTTGGAGGCTATTGAGGAAAAAGAAATTCCTGCAACCAAACAAGATATCCCTGTCATTCCTAAAATTAGGCCAAGTCAAAATGCATCATCAGTCACAGTGGAAACCAAAGGAACAGCAGAGAGTGAAAGAGCTGGTGGAGAAGTTCCTTGGAGTTCTACACAGAGGGAAGTGCAGAGAGAGTGGACTTGTGCTATATGTTTGGTAACAACATCGCGTGAGAAAGACTTGATTTCCCACCTTAATGGAAGGAAACACAGGGTTGCTAGCGAAGCTTTGATAGCAAAGAAGCAACCTACCCTGCAGAAGCAAAAGGATGCAGAAGCGACAACAAATAAAACCATAGCTACTAATAATAAAAAAATACCCAAGAAAAATGGAGAAAGATTCCAAACAGAGAACAAGAACATCAAGTATTTGGAGGCTATTGATAAAAAAGAAATTCCTGCAACCAAGCAATATATTCCTGTCATGCCTAAAATTGCACCAAGTCAAAATGTATCATCAGCCACAGTGGAAACTAAAGGAACGGCAAAGAGCGACAAATCTGGTGAAGAGAATCTTAAGAGTTCTACGCAGAGGGAAGTGCAGAAAGAGTGGACTTGTGCTTTGTGTTCGGTAACAACTTCGAGCAAGATAACCTTGAATTCCCATCTTAATGGGAGGAAACACAGGGATAGTTGTGAAGCTGCTTTGAAAGCAAAGAAGCAACCTGCTTCGCAGAAGAACCTTTCAGAGCCCTTTAGGATGATTAATTCCAAATTAATATGTAAAGATATTCCTGTCATGCCTAAAATTGCATCAAGTCAAAATGCATCATCAGCCACAGTGGAAACTAAAGGAACAGCAAAGAGCGACAAATCTGGTGAAGAGAATCTTAAGAGTTCTACGCAGAGGGAAGTGCAGAAAGAGTGGACTTGTGCTTTGTGTTCGGTAACAACTTCGAGCAAGATAACCTTGAATTCCCATCTTAATGGGAGGAAACACAGGGATAGTTGTGAAGTTGCTTTGAAAGCAAAGAAGCAACCTGCTCCGCAGAAGCTGAACATCTATCAGTCCAAAGATGAGGTGAAACAGAAGAATGTTAGCAATAAGTTCAATTCCAATGTTAAGAATGGACATAATATTCTTAAGAAAGGATTAAAGGGAACAGTAGTGACGGATGATAAGGTTCAAAAGAATCAGTCTGAGCCTGTTAGGATGCATAATTCGAAATCAATATGTAGAGTCTGTGATGTTGTCCTTCTCAGTGAGGCCAATGTGGTCTCTCGCATGAATGGGAAGAAGCATTTGGCTAAAATGCAAAGCAAAGTTGATAGTTTAAATAACTTTAAGGACATTGGCATTGCTTGA 1800 0.4089 MRELLVQTNAERIQTEHKDMKDLEAVEKKEIHETKQDIPVIPKIGPSQIGSSATMETKGTAEGDMAGGEVPQSSSTLKDVQKDWTCALGLVTTSSEEILNSHFSGGKHGAALQKQKDAEAINEITATDNKEIVKVTNGERLQTEHKDIKDLEAIEEKEIPATKQDIPVIPKIRPSQNASSVTVETKGTAESERAGGEVPWSSTQREVQREWTCAICLVTTSREKDLISHLNGRKHRVASEALIAKKQPTLQKQKDAEATTNKTIATNNKKIPKKNGERFQTENKNIKYLEAIDKKEIPATKQYIPVMPKIAPSQNVSSATVETKGTAKSDKSGEENLKSSTQREVQKEWTCALCSVTTSSKITLNSHLNGRKHRDSCEAALKAKKQPASQKNLSEPFRMINSKLICKDIPVMPKIASSQNASSATVETKGTAKSDKSGEENLKSSTQREVQKEWTCALCSVTTSSKITLNSHLNGRKHRDSCEVALKAKKQPAPQKLNIYQSKDEVKQKNVSNKFNSNVKNGHNILKKGLKGTVVTDDKVQKNQSEPVRMHNSKSICRVCDVVLLSEANVVSRMNGKKHLAKMQSKVDSLNNFKDIGIA 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g03452 599 SMART ZnF_U1_5 346 380 IPR003604 GO:0003676|GO:0008270
Mepo2g03452 599 SMART ZnF_U1_5 451 485 IPR003604 GO:0003676|GO:0008270
Mepo2g03452 599 SMART ZnF_U1_5 81 115 IPR003604 GO:0003676|GO:0008270
Mepo2g03452 599 SMART ZnF_U1_5 552 586 IPR003604 GO:0003676|GO:0008270
Mepo2g03452 599 SMART ZnF_U1_5 208 242 IPR003604 GO:0003676|GO:0008270
Mepo2g03452 599 MobiDBLite consensus disorder prediction 418 446 - -
Mepo2g03452 599 SUPERFAMILY beta-beta-alpha zinc fingers 431 484 IPR036236 -
Mepo2g03452 599 PANTHER OS06G0651300 PROTEIN-RELATED 418 585 - -
Mepo2g03452 599 MobiDBLite consensus disorder prediction 432 446 - -
Mepo2g03452 599 SUPERFAMILY beta-beta-alpha zinc fingers 200 246 IPR036236 -
Mepo2g03452 599 Gene3D Classic Zinc Finger 538 587 - -
Mepo2g03452 599 MobiDBLite consensus disorder prediction 175 203 - -
Mepo2g03452 599 SMART c2h2final6 454 478 IPR013087 -
Mepo2g03452 599 SMART c2h2final6 211 235 IPR013087 -
Mepo2g03452 599 SMART c2h2final6 349 373 IPR013087 -
Mepo2g03452 599 Pfam Zinc-finger of C2H2 type 211 235 - -
Mepo2g03452 599 Pfam Zinc-finger of C2H2 type 349 373 - -
Mepo2g03452 599 Pfam Zinc-finger of C2H2 type 454 478 - -
Mepo2g03452 599 MobiDBLite consensus disorder prediction 327 342 - -
Mepo2g03452 599 Gene3D Classic Zinc Finger 432 483 - -
Mepo2g03452 599 Gene3D Classic Zinc Finger 326 378 - -
Mepo2g03452 599 Gene3D Classic Zinc Finger 193 239 - -
Mepo2g03452 599 MobiDBLite consensus disorder prediction 315 342 - -
Mepo2g03452 599 MobiDBLite consensus disorder prediction 31 76 - -
Mepo2g03452 599 SUPERFAMILY beta-beta-alpha zinc fingers 326 380 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g03452 Mepo-Chr2 44184111 44188567 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g03452 351 590 C2H2 Transcription Factor Family AT5G61190 23.047 8.20e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g03452 - - mtr:11413365 387.111