LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo2g03448	ATGGCAGCATCTTGCTACCATCACAAACCTCATCTTCTTGCTTTCTTTCATGTTACATTAACATTCTTGCTTCTTGTAACATCTCGTGCAGCTCCATTATCATTCAACTATGAACAACTTGGCGGTGACAAAACAAATACCTTCAATATTTCAGGTGATGTCTATCAAGACAACCAAGTCCTCCAACTCACAAAGTACGAGAGAGACAGTCTAGGCAGAGTCACATATTCAAAATTGTTTCATCTTTGGGACATAAAAACAAGTGAAGTCACAGATTTCAATACTCGTTTCTCATTTACTATCAACACCCCCAACAAAACCCATCATGCAGATGGCATGACCTTCTATTTGGCACACCCCAATTTTCCCATGTCCCAAATATATGGAGGCGGTATCGGTCTTGCGAGCCTTGTTCAATTGAGTGATCCAAATTACACAAAAGAAAATCCATTTGTAGCTGTGGAATTTGATACCTTCGTTAATGAATGGGATCCTAACTATGATCATGTTGGGATTGATGTTAATTCATTCAACACTGATCTCACTACACAATGGTTCACTAGCATGGATGAAAGAGGATATGATGCTGAAGTCAGTTACGATTCAAGTTCAAACAATTTAACTGTCACATTTACAGGTTACCAACATAACAACACAATCCAACAACACCTGTTTTATGTTGTTAATCTGAGAGATGTTCTGCCTGATTGGGTTGAATTTGGATTCACTTCAGCAACAGGAACTTTTTGGGAGTATCATACTCTTAGCTCATGGTCGTTCAACTCAAGTATAGATTTTGAAGCAAAAGAAGATGAAACAAAAACAGGACTAGTTATAGGACTCGGTGTTGGTGGAGGTGTTGCTTTGATTTGTGTTATTGGGCTGGTTTGTCTCTTGAAATGGAAGCTGAGGAAGAAAGGCATGAAGGATGCTTTGCATTTTGATCTTGCAATGGATAGTGATTTTGAAAGAATCTCTCTACCTAAGAAATTTACCTATGAAGAACTTGCTAGATCAACTAACAACTTTGCAAATGAACACAAAATTGGAGCTGGAGGTTTTGGAGCAGTGTACAAGGGATTTATAAGAGACTTGAAACATCATGTTGCAATTAAGAAGGTTTCTAAGGAATCAAATCAAGGAGTGAAGGAATATGCATCGGAAGTCAAAGTCATTAGCCAATTGAGGCATAAGAATTTGGTCCAACTCTATGGCTGGTGTCACAAGCAGAATGATCTGCTTTTAGTTTATGAGTTTGTGGAAAATGGAAGCTTAGATTCTTATATTTTCAAAGGAAAAGGTTTGCTGATATGGACAGTGAGATATAATATAGCTAGAGGGTTGGCCTCTGCATTATTGTACCTGCATGACGAGTGTGAGCATTGTGTGCTACATAGAGACATAAAATCAAGCAATATTATGTTGGATACAAATTTCAATACAAAGCTTGGAGATTTCGGGCTCGCTAGACTAATGAACCATGAGACAGAATCAAAGACAACTGTTTTAGCTGGAACATATGGATATCTATCACCTGAAGCTGCTACTAGAGGAAAGGCTAGTAGAGAATCTGATGTATATAGTTTTGGAGTTGTTGCTTTGGAAATAGCTTGTGGTAGAAAGGCAATTGAACCAAGTCTTAGTGAAGAAAATATTTACTTGGTGGATTGGGTTTCGGAACTATATGGTATTGGTGATCTTCTTAAAGCAGCTGATTCAAGATTATATGGTGAATTTAATGAGAAGGAAGTAGAGAGGTTAATGATTGTTGGACTTTGGTGTACTCATATAGATCATCTTCAGAGACCTATGATTAGGCAAGTTGTTCAGGTGCTTAACTTTGATGCTCCATTACCTACTCTTCCATTACAGATGAATGCATCTACCTATAATACATCTTTCAATTCTGTGTCCTCTAAATCTAAGATTTCTGGTTTTGAAAATAACCAAACTGGGACGTCAATTTCAAGTAATAGCACTATCACCGGGTCCTCACAATCAAGCACAGCCTTTGAAGTCATATCTTCATCAGCTGCACTTCTAAATACGCACTAG	2055	0.3786	MAASCYHHKPHLLAFFHVTLTFLLLVTSRAAPLSFNYEQLGGDKTNTFNISGDVYQDNQVLQLTKYERDSLGRVTYSKLFHLWDIKTSEVTDFNTRFSFTINTPNKTHHADGMTFYLAHPNFPMSQIYGGGIGLASLVQLSDPNYTKENPFVAVEFDTFVNEWDPNYDHVGIDVNSFNTDLTTQWFTSMDERGYDAEVSYDSSSNNLTVTFTGYQHNNTIQQHLFYVVNLRDVLPDWVEFGFTSATGTFWEYHTLSSWSFNSSIDFEAKEDETKTGLVIGLGVGGGVALICVIGLVCLLKWKLRKKGMKDALHFDLAMDSDFERISLPKKFTYEELARSTNNFANEHKIGAGGFGAVYKGFIRDLKHHVAIKKVSKESNQGVKEYASEVKVISQLRHKNLVQLYGWCHKQNDLLLVYEFVENGSLDSYIFKGKGLLIWTVRYNIARGLASALLYLHDECEHCVLHRDIKSSNIMLDTNFNTKLGDFGLARLMNHETESKTTVLAGTYGYLSPEAATRGKASRESDVYSFGVVALEIACGRKAIEPSLSEENIYLVDWVSELYGIGDLLKAADSRLYGEFNEKEVERLMIVGLWCTHIDHLQRPMIRQVVQVLNFDAPLPTLPLQMNASTYNTSFNSVSSKSKISGFENNQTGTSISSNSTITGSSQSSTAFEVISSSAALLNTH	684

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo2g03448	684	ProSitePatterns	Legume lectins alpha-chain signature.	234	243	IPR000985	-
	Mepo2g03448	684	Gene3D	-	31	282	-	-
	Mepo2g03448	684	FunFam	Lectin-domain containing receptor kinase A4.3	420	632	-	-
	Mepo2g03448	684	FunFam	L-type lectin-domain containing receptor kinase IX.1	328	419	-	-
	Mepo2g03448	684	Gene3D	Transferase(Phosphotransferase) domain 1	420	634	-	-
	Mepo2g03448	684	Pfam	Legume lectin domain	33	274	IPR001220	GO:0030246
	Mepo2g03448	684	Gene3D	Phosphorylase Kinase; domain 1	328	419	-	-
	Mepo2g03448	684	CDD	STKc_IRAK	349	613	-	-
	Mepo2g03448	684	ProSitePatterns	Protein kinases ATP-binding region signature.	349	373	IPR017441	GO:0005524
	Mepo2g03448	684	SUPERFAMILY	Protein kinase-like (PK-like)	327	636	IPR011009	-
	Mepo2g03448	684	Pfam	Protein kinase domain	344	610	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mepo2g03448	684	SMART	serkin_6	343	618	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mepo2g03448	684	ProSitePatterns	Legume lectins beta-chain signature.	152	158	IPR019825	-
	Mepo2g03448	684	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	463	475	IPR008271	GO:0004672\|GO:0006468
	Mepo2g03448	684	PANTHER	-	56	619	-	-
	Mepo2g03448	684	SUPERFAMILY	Concanavalin A-like lectins/glucanases	32	264	IPR013320	-
	Mepo2g03448	684	CDD	lectin_legume_LecRK_Arcelin_ConA	33	263	IPR001220	GO:0030246
	Mepo2g03448	684	ProSiteProfiles	Protein kinase domain profile.	343	621	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mepo2g03448	Mepo-Chr2	44149452	44151594	Dispersed/Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mepo2g03448	18	630	Receptor kinase-like Gene Family	AT5G10530	44.427	1.80e-164	486

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_L-LEC	Mepo2g03448		Pkinase	1.1e-49	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo2g03448	-		-	cam:101491058	1042.34