Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g03423 ATGGAGAATATTTCATTCATCAGAGGGTTTTCTGATCAGGAAATGATGGAGGATCCTTTATTTCTTCATCATCAGTGGCATTTGAGCTCTATCAATGAGTCTAACTCACTTCCAATAGGTGCTGCTTTTGGAGACACTTCACAACACCATTCATACGTTTATCCAAACTTCAACCCTAGAACTTCAATGGAAACTGCTCAGACACTAGAGACTCAATTTGTTCCGTACCCGAATCTTCTTTCGTTTGTCGATTTGAATCAGTTAAATCAGTTGGGATTCGTGAAGCCTAAGGATGAGATGATTGGTTCTCAAAACAACAACACAACTTCTTCCGACATGATTTCTCAAGGAACCTTTGAGGCCAAAAAGGTAGCAACACGTCCTAAACTCTCTCTTCCTCAAGACCATATAATTGCTGAAAGAAAGCGACGTGAGAAGCTAAGCCAACGCTTCATTGCTCTATCTGCCCTTGTTCCCGGACTACAGAAGATGGACAAAGTTACTGTTCTTGGAGATGCTATCAAGTACTTGAAGAAATTGCAAGAGAAGGTGAAGGTTCTTGAGGAGGAACAAAACATGAAGAAAAACGTGGAATTTGTGGTGGTTGTGAAGAAATATCAACTATCCAACGATGTTGAAAACTCTTCTGCAGAATTTGGTGGTCCCTTTGACGAGGAACTACCAGAAATTGAAGCAAGATTTTGTGATAGAAATGTCCTCATAAGAGTTCATTGTGAGAAAATCAAAGGAGTTGCGGAAAAAACAATCCATGAAATTGAGAAACTCAATCTCAAAGTCACCAATAGCAGTTTCATGACATTTGGGAGTTGTGCACTTGATATAACAATTATTGCACAGATGGATATGGAATTTTCCATGACAGTGAAGGATCTTGTGAGAAACCTACGCTCGGTTTTTACGTCTTTCATCTAA 933 0.3944 MENISFIRGFSDQEMMEDPLFLHHQWHLSSINESNSLPIGAAFGDTSQHHSYVYPNFNPRTSMETAQTLETQFVPYPNLLSFVDLNQLNQLGFVKPKDEMIGSQNNNTTSSDMISQGTFEAKKVATRPKLSLPQDHIIAERKRREKLSQRFIALSALVPGLQKMDKVTVLGDAIKYLKKLQEKVKVLEEEQNMKKNVEFVVVVKKYQLSNDVENSSAEFGGPFDEELPEIEARFCDRNVLIRVHCEKIKGVAEKTIHEIEKLNLKVTNSSFMTFGSCALDITIIAQMDMEFSMTVKDLVRNLRSVFTSFI 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g03423 310 SMART finulus 137 186 IPR011598 GO:0046983
Mepo2g03423 310 Gene3D - 133 202 IPR036638 GO:0046983
Mepo2g03423 310 CDD bHLH_AtNAI1_like 131 205 - -
Mepo2g03423 310 Coils Coil 170 197 - -
Mepo2g03423 310 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 131 180 IPR011598 GO:0046983
Mepo2g03423 310 Pfam Helix-loop-helix DNA-binding domain 135 181 IPR011598 GO:0046983
Mepo2g03423 310 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 135 195 IPR036638 GO:0046983
Mepo2g03423 310 PANTHER BHLH TRANSCRIPTION FACTOR 15 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g03423 Mepo-Chr2 43940175 43942148 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g03423 134 310 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 56.667 7.23e-57 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mepo2g03423 HLH 1.7e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g03423 - - vun:114179595 374.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g03423 2 43940175 43942148 Mepo2g03423 2 43940175 43942148 ECH
Mepo2g03423 2 43940175 43942148 Mepo6g00272 6 2626631 2629222 PCT