Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g03401 ATGAATTCGCACGAGATGAGCAGAACTCTCTTAATTTTGGCAATAGGAATATGCATAGGCTTTGTGATTGGAGCTGGTTTGGTATTTTCAATTTTAGTCTTCTGCAGGTCTGGAAGGAAGCGTGTAGAGGTGGAGAAAAGTGGTCCTCTGAGAACCGAGGCTATTAATGCTCATGCCAAAGGGGCTGATTCCAGCGTAACATTATCAGACTCCAATGCGACTTTTGAATCACCAAGAACATCGGAATGGAGCAACACGCCTTTCTGGTTAGAAGGACTTAGGAGGAAGAATGCTGTCTCAGTTTGTGGAATTCCCAAATATTCTTACAAAGATATAGAAAAGGCTACTTCTAATTTCACATCGATCATAGGCCATGGAGCATTTGGTCCTGTTTACAAAGCAATCATGCCTACAGGCGAGGCAGTTGCAGTTAAAGTTCTCGGTGCTAATTCGAGACAAGGAGAACAAGAATTTTTAACTGAGGTCCTATTACTTGGAAGATTACATCATAAGAATCTTGTGGGTTTGGTGGGATATGCTGCAGAAAGAGGACGGCACATGCTTCTTTACATTTACATGTGCAACGGCAGTCTTGCTTCTCATTTGTATGGCGAAAATCATGAGCCGTTGAGCTGGAATTTGAGACTTAGCATAGCACTAGATGTTGCAAGGGTGATGGAATATCTACATTATGCGGTCGATCCTCCTATTGTGCACCGTGACATCAAGTCTTCCAACATTCTGTTGGACAAGTTCATGAAAGCTAAGGTCACCGACTTTGGGCTTTCCAGACCAGAAATGATCAAACCTCGTCTGTCAAATGTCAGAGGAACTTTTGGATATCTTGATCCCGAGTATATCTCTACAAGAACCTTCACTAAGAAATGTGATGTTTATAGTTTTGGTGTGCTACTGTTTGAGCTCATTACTGGCAGGAATCCACAGCAGGGCCTCATGGAATATGTAAAACTGGCTGCCATGGAAAGTGAGGACAAGATTGCATGGGAAGAAATTGTGGATCCGCAACTGAATGGAAACTATGATGTACATAAGCTTAATGACATGGCTTCACTTGCACTCAAATGTGTCAATAGTGTCTCCAAAATTCGACCTTCAATGAGGAACATTGTTCAAGCATTATCTCAACTTTATAAGAAGCCTAAGAGAAATTCTAGCAGAGCAGCTCCTCCTGCGCTAAATGAAGTGTCTGTTGAAGTGATGCAGCCAGAAACTTGTGACTTTTCTATCGAGTGTTCAGAGGAGCTGCGCAGATTGCACAGCCGATAA 1287 0.425 MNSHEMSRTLLILAIGICIGFVIGAGLVFSILVFCRSGRKRVEVEKSGPLRTEAINAHAKGADSSVTLSDSNATFESPRTSEWSNTPFWLEGLRRKNAVSVCGIPKYSYKDIEKATSNFTSIIGHGAFGPVYKAIMPTGEAVAVKVLGANSRQGEQEFLTEVLLLGRLHHKNLVGLVGYAAERGRHMLLYIYMCNGSLASHLYGENHEPLSWNLRLSIALDVARVMEYLHYAVDPPIVHRDIKSSNILLDKFMKAKVTDFGLSRPEMIKPRLSNVRGTFGYLDPEYISTRTFTKKCDVYSFGVLLFELITGRNPQQGLMEYVKLAAMESEDKIAWEEIVDPQLNGNYDVHKLNDMASLALKCVNSVSKIRPSMRNIVQALSQLYKKPKRNSSRAAPPALNEVSVEVMQPETCDFSIECSEELRRLHSR 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g03401 428 SMART serkin_6 117 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo2g03401 428 FunFam calcium/calmodulin-regulated receptor-like kinase 1 193 400 - -
Mepo2g03401 428 Pfam Protein tyrosine and serine/threonine kinase 119 380 IPR001245 GO:0004672|GO:0006468
Mepo2g03401 428 SUPERFAMILY Protein kinase-like (PK-like) 103 402 IPR011009 -
Mepo2g03401 428 CDD STKc_IRAK 123 383 - -
Mepo2g03401 428 Gene3D Phosphorylase Kinase; domain 1 89 192 - -
Mepo2g03401 428 ProSiteProfiles Protein kinase domain profile. 117 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo2g03401 428 ProSitePatterns Serine/Threonine protein kinases active-site signature. 237 249 IPR008271 GO:0004672|GO:0006468
Mepo2g03401 428 Gene3D Transferase(Phosphotransferase) domain 1 193 402 - -
Mepo2g03401 428 PANTHER OS01G0750732 PROTEIN 24 393 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g03401 Mepo-Chr2 43682055 43685376 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g03401 103 382 Receptor kinase-like Gene Family AT3G19300 42.014 2.41e-72 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Mepo2g03401 PK_Tyr_Ser-Thr 8.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g03401 - - gmx:100816549 587.415