Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g03392 ATGGAACAAGTAAATAACAATAGATTATGTGTATCTATGGAAGAGTTGGGTTTCAATGCTGAAAATGGTAGCAATAGGGGAAACTGGAGAAGGAACAAGAACCGTGATAATGATGGTGTACCAAAAGTGTTCACCTCCAAGAACCTTGAGACAGAAAGAAAGAGAAGGGAGAAACTCACTAGCAGACTTTTGGTGCTTAGGTCTTTAGTACCAATCATCACAAATATGAACAAAGCAAGCATTATTGAGGATGCTATCACTTATACCATGAAATTGCAACATGAAGTTGAGAGTCTCACACTAGAGCTTGATGGAATGGAACCAAGAAGAGAGAAAAGAGCTGAGCCAAAACAAAGAGAGTTTTCTGCTGTTGATGAGATGAATAAAATGGGGTTACAGGAAGAGGTGCAGGTAGCAAAAGTTGATGGGAATAAGCTATGGATTAAGTTGCTCATTGAGAAGAAAAGAGGAAGGTTCAACAAATTAATACAAGACTTGAATGATTTGAACATTGAAATGGTAGACCTCAGTGTTACAACTATAGCAGGAGCATATCTCATTACAGCCTCCTTACAGGACATGGGTGGTGAACCACTTGAACTTTATCGAATTCCAACTATTATCAAGTACTAG 633 0.3839 MEQVNNNRLCVSMEELGFNAENGSNRGNWRRNKNRDNDGVPKVFTSKNLETERKRREKLTSRLLVLRSLVPIITNMNKASIIEDAITYTMKLQHEVESLTLELDGMEPRREKRAEPKQREFSAVDEMNKMGLQEEVQVAKVDGNKLWIKLLIEKKRGRFNKLIQDLNDLNIEMVDLSVTTIAGAYLITASLQDMGGEPLELYRIPTIIKY 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g03392 210 MobiDBLite consensus disorder prediction 21 42 - -
Mepo2g03392 210 Pfam Helix-loop-helix DNA-binding domain 49 93 IPR011598 GO:0046983
Mepo2g03392 210 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 43 92 IPR011598 GO:0046983
Mepo2g03392 210 Gene3D - 45 120 IPR036638 GO:0046983
Mepo2g03392 210 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 24 189 - -
Mepo2g03392 210 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 46 107 IPR036638 GO:0046983
Mepo2g03392 210 Coils Coil 152 172 - -
Mepo2g03392 210 SMART finulus 49 98 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g03392 Mepo-Chr2 43589581 43590906 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g03392 44 192 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G21330 44.654 6.22e-38 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mepo2g03392 HLH 5.8e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g03392 - - mtr:25493240 395.971