LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo2g03374	ATGAGCATGATCATAGGATACAAAGTTTCATTCTTCATGTTGTTGTCTTTCTTCTCTTTTCTCTGTTTTCATCCTCTGTTTTTGCATGCAGCCAACTCTATCTCACAGAATGAAACTATCAAAGATGGTTCCACTTTGGTCTCAGAAGATAGAGAAAATAACAAAGAGATTTGGCAAAGTTTTGAAGATCCAACTGATACATATCTTCCAGGCATGAAAGTTCCGGCAAGTGGTGGAAGTGGAATCGGGAAGGATGCAACTTTTTGCTCGTGGAAATCGGAGAATGATCCTTCATTAGGAAACTATACAATGACTGTTGATTCTGAAGCAACGCCACAGATAGTGATTATGGAAGGAGAGAAAAGAAGGTGGAGAAGTGGTTATTGGGATGGTAGAGTTTTCACAGGTGTACCAAATATGACAGGAAGTTATCTTTTTGGTTTTAGGCTTAACACAAACGATAATGGAGAAAGGTATTTTATATATGAAGCATTGGAAAATAGTGATAAGATAAGGTTTCAGCTTGGATATGATGGATATGAGAGACAATTCAGGTGGAATGAAGAAGATAAAGAATGGAATGTGATACTAAGTGAGCCTAATAAGAAGTGTGAGTTTTATAATTCATGTGGTAGTTTTGCAATATGTGATATGTCTGATTCAACTTTGTGCAAATGCATAAAAGGGTTTGAGCCAAAGGATGTGAAAAGTTGGAATAGTGGGAATTGGTCAAAAGGGTGTAAGAGGATGACTCCATTGAAGGGTGAGAGAAGTGGTAATAGTTCTGGTGGAGAAGATGGTTTTTTGGTGCAAAGGGGTTTGAAGCTGCCTGATTTTGCACGTTTGGTGAGTGCTGTTGATAGTAAGGATTGTGAGGCAAATTGTCTGAAGAATAGTTCTTGTACTGCTTATGTAAATGCTATTGGAATTGGGTGTATGGTTTGGCATGGGGAGTTAGTTGATGTTCAAAGGTTAGAAAATCAAGGAAATACACTCAACATTCGTCTTGCTGATTCTGATATAGGTGATGGGAAGAAAAGGACCAAAATTGGGATAATATTAGGTGTTGTGGCGGGGCTTATCTTCCTTGGAATCTTTGTATGGCTTCTATGTAGGTTTAAGAGAAAACTCAAAGTTTCCTCAACTTCTTCTACTTCCAACATTAATTGTGATGTACCAGTTTCCGAACCAACCAAGAGTGGAAACTTATCAGCAGGATTTTCAGGATCAATTGATCTTCACTTAGATGGGAGCCCTCTAAATAATGCAGAACTTTCATTCTTCAATTTTAGTAGCATTGTAATTGCAACAAACAATTTCTCAGAAGAAAACAAGCTTGGACAAGGGGGATTTGGTCCTGTCTACAAGGGAAAGCTTCCAGGGGGAGAACAAATCGCGGTCAAGAGGCTTTCTAGACAGTCGAACCAAGGTTTAGACGAGTTCAAGAATGAAATGATGCTAATAGCTAAATTACAGCATAGAAATCTTGTTAGACTATTAGGATGTTCAATTGAAGGGGAAGAAAAGTTACTTGTATATGAATACATGCCAAACAAAAGTTTGGACCGCTTCTTATTTGATCCAGTCAAGAAAACAAAACTAGACAGCTCAAGACGGTATGAAATCATCGAGGGCATTGCAAGAGGACTACTTTATCTGCACCGTGATTCACGGCTTAGAATAATCCATCGAGATCTAAAAGCAAGCAACATTTTGTTGGATGAAAATATGAATCCAAAAATTTCAGACTTTGGCTTGGCAAAGATATTTGGGGGAAATCAAAATGAAGGGAATACAGAGAGAGTAGTTGGAACATATGGATATATGTCTCCAGAATATGCAATGGAAGGTCTATTTTCAGTCAAATCTGATGTCTATAGTTTTGGCGTACTACTACTAGAGATTGTGAGTGGTCGCAAAAACACTAGCTTTCGTGATTCGTATGACCCAAGTCTCATAGGATATGCGTGGCGTCTATGGAATGAAGAGAGAATAATGGAGCTTGTCGATCCGTCCATACGCGATTCAACTAAAAAAAGTAAAGCTTTAAGATGCATACACATAGGGATGTTATGTGTGCAAGATTCAGCATCTCATAGACCAAACATGTCCTCAGTGGTGTTGATGCTTGAAAGTGAAGCAACAATTCTTCCCTTGCCTGTCAAACCTTTGCTCACTTCCATGAGAAGATATGATGATACAGAAGAATTTAATACTGAACCTTTTGATGCCTCAGTTGATCTGACTGTCACAGGGAGATAG	2262	0.3851	MSMIIGYKVSFFMLLSFFSFLCFHPLFLHAANSISQNETIKDGSTLVSEDRENNKEIWQSFEDPTDTYLPGMKVPASGGSGIGKDATFCSWKSENDPSLGNYTMTVDSEATPQIVIMEGEKRRWRSGYWDGRVFTGVPNMTGSYLFGFRLNTNDNGERYFIYEALENSDKIRFQLGYDGYERQFRWNEEDKEWNVILSEPNKKCEFYNSCGSFAICDMSDSTLCKCIKGFEPKDVKSWNSGNWSKGCKRMTPLKGERSGNSSGGEDGFLVQRGLKLPDFARLVSAVDSKDCEANCLKNSSCTAYVNAIGIGCMVWHGELVDVQRLENQGNTLNIRLADSDIGDGKKRTKIGIILGVVAGLIFLGIFVWLLCRFKRKLKVSSTSSTSNINCDVPVSEPTKSGNLSAGFSGSIDLHLDGSPLNNAELSFFNFSSIVIATNNFSEENKLGQGGFGPVYKGKLPGGEQIAVKRLSRQSNQGLDEFKNEMMLIAKLQHRNLVRLLGCSIEGEEKLLVYEYMPNKSLDRFLFDPVKKTKLDSSRRYEIIEGIARGLLYLHRDSRLRIIHRDLKASNILLDENMNPKISDFGLAKIFGGNQNEGNTERVVGTYGYMSPEYAMEGLFSVKSDVYSFGVLLLEIVSGRKNTSFRDSYDPSLIGYAWRLWNEERIMELVDPSIRDSTKKSKALRCIHIGMLCVQDSASHRPNMSSVVLMLESEATILPLPVKPLLTSMRRYDDTEEFNTEPFDASVDLTVTGR	753

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo2g03374	753	Pfam	D-mannose binding lectin	39	92	IPR001480	-
	Mepo2g03374	753	ProSiteProfiles	PAN/Apple domain profile.	247	337	IPR003609	-
	Mepo2g03374	753	Pfam	PAN-like domain	264	322	IPR003609	-
	Mepo2g03374	753	SUPERFAMILY	alpha-D-mannose-specific plant lectins	45	131	IPR036426	-
	Mepo2g03374	753	ProSiteProfiles	Protein kinase domain profile.	440	716	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mepo2g03374	753	FunFam	G-type lectin S-receptor-like serine/threonine-protein kinase	516	718	-	-
	Mepo2g03374	753	Gene3D	Transferase(Phosphotransferase) domain 1	516	716	-	-
	Mepo2g03374	753	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	561	573	IPR008271	GO:0004672\|GO:0006468
	Mepo2g03374	753	SMART	ntp_6	263	336	IPR003609	-
	Mepo2g03374	753	FunFam	G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230	408	515	-	-
	Mepo2g03374	753	CDD	PAN_AP_plant	261	337	-	-
	Mepo2g03374	753	SUPERFAMILY	Protein kinase-like (PK-like)	426	731	IPR011009	-
	Mepo2g03374	753	Pfam	Protein tyrosine and serine/threonine kinase	443	708	IPR001245	GO:0004672\|GO:0006468
	Mepo2g03374	753	CDD	STKc_IRAK	446	711	-	-
	Mepo2g03374	753	SMART	serkin_6	440	710	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mepo2g03374	753	PIRSF	SRK	27	751	IPR024171	GO:0004674
	Mepo2g03374	753	Gene3D	Phosphorylase Kinase; domain 1	414	515	-	-
	Mepo2g03374	753	PANTHER	RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8	35	723	-	-
	Mepo2g03374	753	Pfam	S-locus glycoprotein domain	124	233	IPR000858	GO:0048544

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mepo2g03374	Mepo-Chr2	43456308	43459773	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mepo2g03374	415	723	Receptor kinase-like Gene Family	AT4G23230	60.323	5.70e-129	395

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Mepo2g03374		PK_Tyr_Ser-Thr	7.5e-49	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo2g03374	-		-	cam:101504189	1160.59