Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g03370 ATGGCGAGAAAATCTTCATCGGCGAACGAGGAGCTTCTACCGGATGAACTCCGGTGCGGAAGAACCGACGGGAAGCAATGGCGGTGTAAGAGGAGAGTGATGGATAATCTGAAATTGTGTGAGATTCATTATCTACAAGGGAAGCATCGTCAATATAGAGAAAAGGTACCAGAGTCTTTGAAGCTTCAGAGAAAGCGTAAGAACAAGGAAGAGGAACAAGAACAAGAAACTGCTGTTGGTGTTGACAATGTGGAAGAAACAGTTAGGGTAGAAAAAGAGTTCAAAATGGAGCTGAGAAAAACTAAGAAGAAGAAAGTGAAGCTTGCAGAGAGTTCTGAATCGTTGACAGATTCACCTTCTGGTTCTGTTCCTGCAAGGAAGAAGACATTGAAGCAATGTGATACACAATTGGATCTTATAAGAATGGTTTTGGAGAGAGAAGTTGAGAAGAGGAAAAGAAACAATACCAATAAGAAGAAGAATAAGAAAAAGAAGATGAAGAAAAAGGTGATTAAAGAAGAAATGGAATTGCATGATTTTAAAGAAGGTGAGTTGAGGAGAGAATTACCAAATGGAGTAATGGAGATATCACCGGCTTCGACGCCGGGTGATTATAAAAATGTGGGGACTCATTGTGATGTGAAAGTTGGTGATCATAAGATTGTAGCTGTAACGCCGCATTACTTCCGGTCCAAGAATATTGATAGGGTTGCTCTTGGAAAGTTGCAGGTTGTGCCTTATGGACCAAGCTTGAAGAAGGGGAACACTAAGAGGAAGTGTCACTCATGCCAGAGAAGTGATTCTTTGAATCTTGTCCAGTGTTCGAGCTGTCACAAGGAGTTTTTCTGCTTTGATTGTATAAGAGATCGGTATCTTGACACTAGAAAAGAAGTTAAGAAGGCGTGCCCAGTTTGTCAACGGACTTGCACTTGTAAGGTCTGCTTGGCAAGTGAAAGTAATGGCAGTGAAAGTAAGGACAGTGAAAGTAAGGCCTATTTGTCTAGCAAAAGTAGAGTTGATAGAATACTCCATTTTCATTATTTGATCTGCATGCTCCTACCAGTACTAAAGCGAATAAGTGAAAACCGAGACACTGAGCTAGAAACAGAAGCAAAAATTAAAGGGAAAAGTATTTCTGATATTCAAATCAAGCAGGTTGAATTTGGTTACAGTGAAAATATTTACTGCAATCACTGCAAAACACCTGTCTTGGATCTCCATAGAAGCTGTGATAGTTGTTCGTATAGCCTATGCTTAAGATGTTGTGAGAAACTATGTCAAAGAACTTCTGGAGAAATTAACTCATCTTTCTTGAAGCTACGTGATCAAATGAAAGCTTGTGTGGACAGTGAGCACCGTATTTTGGATCAGAAGGACATTTGTTGTGGCAATTTAACTGCAACTTCAACATTGCCCCAGAGGACAAATTGTAATGATATTGAAAAAGCATCATGCCGTCCTACGGAGGTTGGTGGATGTGGTACAGGCCTATTTGATTTAACTGCTACTTCAACACTGCCCGAGAGGACAAGTTGTAATGATGTTCAAAAAGTATCATGCCCTCCTATGGAGCTTGGTGGATGTGGTACAGGCCTGCTTGATTTAACTACTACTTCAACATTGCCCGAGAGGACAAATTGTAATGATAGCAAAAAAGTATCATGCCCTCCTACGGAGCTTGGTGGACGAGATATAGGTCTGCTTGATTTAACTACTACTTCAACGTTGCCCGAGATGACAAATTGTAATGATAGCAAAAAAGTATCATCCCCTCCTATGGAGCTTGATGGACGAGATACAGGTCTGCTTGATTTAACTGCTACTTCAACATTGTCCGAGATGACCAATTGTAATGATAGTGAAAAAGTATCATGCCCACCTACGGAGCTTGGTGAATGTAGTACAGGTCTGCTTGATTTAACTGCTACTTCAACATTGCCCGAGAGGACAAATTGTAATGATATTGAAAAAGTATCATGCCCTCCTACGGAGCTTGGTGGACGAGATACAGACCTGCTTGATTTAACTGCTACTTCAACATTGCCCGAGAGGACAAATTGTAATGATATTGAAAAAGTATCATGCCCTCCTACGGAGCTTGGTGGACGAGATACAGACCTGCTTGATTTAACTGCTACTTCAACATTGCCCGAGAGGACAAATTGTAATGATATCGAAAAAGTATCGTGCCCTCCTACGGAGCTTGGTGGACGAGGTACAGACATGCTTGATTTAACTGCTACTTCAATGTTGCCCGAGAGGACAGATTGTAATGATATTGAAAAAGTATCATGCCCTCCTACGGAGCTCGGTGGATGTGGTACAGGCCTTCTTGATTTATTATGCATTTTTCCCTCGACTTTACTCAGAGAGATGGAAGTAAAAGCAGAAGAAATTGTTTGTAGCTATGACTTTCCTGAAACTTCGGATAAAAGTTCAAGCTGCTCACTGTGTTTTGACACCGACCTCAATACTGACCGATATAATCAGTTGCAGAAAGCTGCTGAGAGAGGAGATTCATCAGATAATTGCTTGTTTTGTCCTACAGTTTTGGACATCAGTGGTCATAACTTTGAGCACTTTCAGAAACACTGGGGAAAAGGCCAGCCTATAGTGGTCCAAGATGTGCTCCAAAGTACATCAAACCTCAGTTGGAATCCACTGTTCATGTTCTGTACTTATCTTGAGCAGAGCATTACAAAGTATGAGAATAATAAAGAGTTACTTGAATCCTGTTTGGATTGGTGTGAGGTGGAAATAAACATTAGGCAGTATTTTACCGGGTCTCTCAAATGTCGTCCTCAGAGAAACACTTGGCATGAGATGCTGAAACTGAAGGGATGGTTGTCTTCCCAAGTATTCAAAGAGCAGTTTCCAGCTCATTTTTCTGAAGTAATTGATGCTCTACCTGTTCAAGAATACATGAATCCTGTGTCTGGTCTTCTGAATTTAGCTGCAAATTTGCCAGACAGGAGTGCGAAACATGACATTGGGCCATATGTCTATATTTCGTATGGCTGTGCTGACACAGAAGCTGATTCTGTGACAAAACTCTGTTGTGACTCATACGATGTGGTTAATATTATGACACATTCTGCGGATGTCCCTCTCTCTACAGAACAACTTGCAAAAATAAGGAAATTGTTGAAGAAGCACAAAGCTCTGTGTCAAGTGGAGTCTGTTGCTACTGAGCTGTTACCTGAACGGGAAGTGAAAGGGATGGCATTATCACATGCTGAAGAAACGGTACAGAAGGGTTTTCCAAGTATGGGGAAAGAAGGAATCGAGTTTTTCAGGAGAGTCGATAGAACATCTTGCATCTCCTCAACTGGAGCTAAAATAGCTTCTACTCAGAGCATATACAACAATATTTCCCAGGCCGGAGAACGCAATATCGTTTCTGATTCTGAACCCTCTCTTCATGGGACTGTTCCTACCACCAATTTGTCACCTAGAAGTCCCGCTGAAAGCTCTAACTGTTATAAGAAAAAGTTCACTGAGCATTCAGGTGCCCAGTGGGATGTCTTTCGAAGACAAGATGTACCAAAGCTCGTAGAATACATTAAAAGACACTACGATGAACTTACTAATACTCATGACTCTCACAAGAAGATGGTTCATCCAATTCTAGATCAGAGCATTTTTCTTGACCATATTCACAAAATGAGACTGAAGGAGGAGTTTAAGATTGAACCATGGACTTTCCAGCAACATGTTGGAGAAGCTGTCATCATTCCTGCTGGTTGTCCGTACCAGATAAGAAATTCCAAGTGTTGTGTCCATGCGGTATTGGAGTTTGTGTCCCCTGAAAATGTTGCCGAGTGTATCCAGTTGATTGACGAGGTCAGACGGTTACCTGAAGACCATAAAGCAAAAGTAGACAAGCTTGAGGTGAAGAAAATGGCACTGCTTAGCATGAGCTCAGCAATTGACGAAATACGCCAGCTTACATGCAAAACATGA 3963 0.4138 MARKSSSANEELLPDELRCGRTDGKQWRCKRRVMDNLKLCEIHYLQGKHRQYREKVPESLKLQRKRKNKEEEQEQETAVGVDNVEETVRVEKEFKMELRKTKKKKVKLAESSESLTDSPSGSVPARKKTLKQCDTQLDLIRMVLEREVEKRKRNNTNKKKNKKKKMKKKVIKEEMELHDFKEGELRRELPNGVMEISPASTPGDYKNVGTHCDVKVGDHKIVAVTPHYFRSKNIDRVALGKLQVVPYGPSLKKGNTKRKCHSCQRSDSLNLVQCSSCHKEFFCFDCIRDRYLDTRKEVKKACPVCQRTCTCKVCLASESNGSESKDSESKAYLSSKSRVDRILHFHYLICMLLPVLKRISENRDTELETEAKIKGKSISDIQIKQVEFGYSENIYCNHCKTPVLDLHRSCDSCSYSLCLRCCEKLCQRTSGEINSSFLKLRDQMKACVDSEHRILDQKDICCGNLTATSTLPQRTNCNDIEKASCRPTEVGGCGTGLFDLTATSTLPERTSCNDVQKVSCPPMELGGCGTGLLDLTTTSTLPERTNCNDSKKVSCPPTELGGRDIGLLDLTTTSTLPEMTNCNDSKKVSSPPMELDGRDTGLLDLTATSTLSEMTNCNDSEKVSCPPTELGECSTGLLDLTATSTLPERTNCNDIEKVSCPPTELGGRDTDLLDLTATSTLPERTNCNDIEKVSCPPTELGGRDTDLLDLTATSTLPERTNCNDIEKVSCPPTELGGRGTDMLDLTATSMLPERTDCNDIEKVSCPPTELGGCGTGLLDLLCIFPSTLLREMEVKAEEIVCSYDFPETSDKSSSCSLCFDTDLNTDRYNQLQKAAERGDSSDNCLFCPTVLDISGHNFEHFQKHWGKGQPIVVQDVLQSTSNLSWNPLFMFCTYLEQSITKYENNKELLESCLDWCEVEINIRQYFTGSLKCRPQRNTWHEMLKLKGWLSSQVFKEQFPAHFSEVIDALPVQEYMNPVSGLLNLAANLPDRSAKHDIGPYVYISYGCADTEADSVTKLCCDSYDVVNIMTHSADVPLSTEQLAKIRKLLKKHKALCQVESVATELLPEREVKGMALSHAEETVQKGFPSMGKEGIEFFRRVDRTSCISSTGAKIASTQSIYNNISQAGERNIVSDSEPSLHGTVPTTNLSPRSPAESSNCYKKKFTEHSGAQWDVFRRQDVPKLVEYIKRHYDELTNTHDSHKKMVHPILDQSIFLDHIHKMRLKEEFKIEPWTFQQHVGEAVIIPAGCPYQIRNSKCCVHAVLEFVSPENVAECIQLIDEVRRLPEDHKAKVDKLEVKKMALLSMSSAIDEIRQLTCKT 1320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g03370 1320 MobiDBLite consensus disorder prediction 576 597 - -
Mepo2g03370 1320 SUPERFAMILY Clavaminate synthase-like 855 1303 - -
Mepo2g03370 1320 Gene3D Cupin 850 1292 - -
Mepo2g03370 1320 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 751 1318 IPR045109 GO:0032454|GO:0033169
Mepo2g03370 1320 MobiDBLite consensus disorder prediction 1134 1156 - -
Mepo2g03370 1320 Pfam JmjC domain, hydroxylase 1167 1261 IPR003347 -
Mepo2g03370 1320 ProSiteProfiles JmjC domain profile. 977 1283 IPR003347 -
Mepo2g03370 1320 ProSiteProfiles WRC domain profile. 13 59 IPR014977 -
Mepo2g03370 1320 MobiDBLite consensus disorder prediction 102 128 - -
Mepo2g03370 1320 ProSiteProfiles Zinc finger RING-type profile. 260 306 IPR001841 -
Mepo2g03370 1320 Pfam WRC 14 55 IPR014977 -
Mepo2g03370 1320 SMART cupin_9 958 1283 IPR003347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g03370 Mepo-Chr2 43414108 43420886 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g03370 8 50 GRF Transcription Factor Family AT4G37740 46.512 5.53e-06 48.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Mepo2g03370 JmjC 1e-09 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g03370 K15601 - gmx:100810673 857.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g03370 2 43414108 43420886 Mepo6g00337 6 3495271 3500769 PCT