Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g03359 ATGCGGAATTTCCAATTCTTCCAACGCTTTTCTAAAAATTTCCGTGACTATGACTCTCAGTTCAAGCTTGTTCTCCTCTGCACCACCGTAAGTGGTGGTGGTCTTTTGGCATACGGTGAGGCTGTTGCTACATCTGAATCTGTGCCGGAAAAGAAAAAGGTGTTAGTGCTGGGAACTGGTTGGGCAGGAACAAGTTTCTTGAGGAATCTCAATGATCCGAGATATGAGGTTCACGTCGTGTCTCCTCGCAATTATTTTACTTTCACTCCTCTGCTTCCTAGTGTTACTTGCGGTACCGTTGAGGCTCGCAGCATTGTGGAACCCGTCCGTAATATCTTCAGGAAGAAACATGTGGACTCTCGATTCAGTGAAGCAGAATGTCTCAAGATTGATGCAGTAAACAGAAAAGTTTACTGTCGATCTAATATAAACAATAATTTGAATGAAAAAGAAGAATTCGTCGTGGACTATGACTACTTAATCATAGCTGTGGGAGCAAATGTCAACACATTTAATACTCCTGGTGTCACGGAGAATTGCCATTTCTTAAAGGAAGTTGAAGATGCACAAAAGATTAGAAGAACTGTAATTGACTGCTTTGAGAGAGCAAGTTTGCCTAGTGTGAGTGATGAAGAGAGAAAGAGAATTCTTCATTTTGCTATTGTTGGAGGTGGTCCAACTGGAGTGGAGTTTGCAGCCGCACTTCATGATTTTGTCAGTGAAGATTTGGTCAAATTATACCCTGGGGTAAAAGATTTAGTTAAAATCACGCTCCTGGAGGCTGGAGGTCATATCTTGAGCATGTTTGACAAAAGAATAACAACTTTTGCTGAAGACAAGTTCAAAAGAGATGGTATTGATGTGAAAACAGGATCCATGGTTACGAAAGTATCTGGCAAAGAAATTACCACTAAAGAAATGAAAAATGGAGAAATTACTACAATTCCATATGGAATGGCTGTCTGGTCAACTGGTATTGGCACTCGTCCATTCATAAAAGATTTTATGACACAAATTGGCCAGATTAACAGACGTGCCATAGCTACTGATGAATGGTTGAGAGTTGAGGGAACCGACAATGTGTATGCGCTTGGTGATTGTGCTACAATAAACCAGCGAAAAGTCATGGAAGATATTGCGGCAATATTTAAGAAGACTGATGCAGACAACTCAGGAACACTTACACTCAAAGAATTTCAGGAGGTAATGAATGACATCTGTGAAAGGTACCCTCAGGTGGAGCTATATCTAAAGAATAAACAGATGCATGGCATTGCTGATCTGTTGAAGGAATCCAAGGGAGATGTTAAAAAAGAATCTATTGAACTCAATATCGAAGAACTCAAGACCGCTTTTTCCAATGTGGACTCCGAGATGAAATTTCTTCCTGCTACAGCTCAGGTTGCATCTCAGCAAGGCACCTACCTGGCCAAATGTTTTAACCGGATGGAAGAGTGTGAAAAAAATCCAGAAGGTCCTATTAGGTTTAGGGGAGAAGGGCGTCATCGGTTCAAACCCTTCAGGTACAAGCATTTAGGTCAATTTGCTCCTCTGGGAGGCGAGCAGACAGCTGCACAGCTACCTGGAGATTGGGTTTCAATTGGACACAGCAGTCAATGGTTGTGGTATTCTGTCTATGCAAGCAAGCAAGTCAGCTGGCGCACAAGGGCGTTAGTGGTGTCAGACTGGATGAGACGCTTTATATTTGGGAGGGACTCGAGTCAAATCTGA 1731 0.4217 MRNFQFFQRFSKNFRDYDSQFKLVLLCTTVSGGGLLAYGEAVATSESVPEKKKVLVLGTGWAGTSFLRNLNDPRYEVHVVSPRNYFTFTPLLPSVTCGTVEARSIVEPVRNIFRKKHVDSRFSEAECLKIDAVNRKVYCRSNINNNLNEKEEFVVDYDYLIIAVGANVNTFNTPGVTENCHFLKEVEDAQKIRRTVIDCFERASLPSVSDEERKRILHFAIVGGGPTGVEFAAALHDFVSEDLVKLYPGVKDLVKITLLEAGGHILSMFDKRITTFAEDKFKRDGIDVKTGSMVTKVSGKEITTKEMKNGEITTIPYGMAVWSTGIGTRPFIKDFMTQIGQINRRAIATDEWLRVEGTDNVYALGDCATINQRKVMEDIAAIFKKTDADNSGTLTLKEFQEVMNDICERYPQVELYLKNKQMHGIADLLKESKGDVKKESIELNIEELKTAFSNVDSEMKFLPATAQVASQQGTYLAKCFNRMEECEKNPEGPIRFRGEGRHRFKPFRYKHLGQFAPLGGEQTAAQLPGDWVSIGHSSQWLWYSVYASKQVSWRTRALVVSDWMRRFIFGRDSSQI 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g03359 576 ProSitePatterns EF-hand calcium-binding domain. 387 399 IPR018247 -
Mepo2g03359 576 SUPERFAMILY EF-hand 367 462 IPR011992 -
Mepo2g03359 576 PRINTS FAD-dependent pyridine nucleotide reductase signature 28 47 - -
Mepo2g03359 576 PRINTS FAD-dependent pyridine nucleotide reductase signature 218 236 - -
Mepo2g03359 576 PRINTS FAD-dependent pyridine nucleotide reductase signature 157 175 - -
Mepo2g03359 576 PRINTS FAD-dependent pyridine nucleotide reductase signature 346 368 - -
Mepo2g03359 576 Coils Coil 438 458 - -
Mepo2g03359 576 Pfam Pyridine nucleotide-disulphide oxidoreductase 52 376 IPR023753 GO:0016491
Mepo2g03359 576 SMART efh_1 378 406 IPR002048 GO:0005509
Mepo2g03359 576 FunFam External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial 42 403 - -
Mepo2g03359 576 SUPERFAMILY FAD/NAD(P)-binding domain 51 270 IPR036188 -
Mepo2g03359 576 Gene3D - 42 420 - -
Mepo2g03359 576 Gene3D - 421 575 - -
Mepo2g03359 576 SUPERFAMILY FAD/NAD(P)-binding domain 212 371 IPR036188 -
Mepo2g03359 576 FunFam External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial 420 575 - -
Mepo2g03359 576 PANTHER NADH DEHYDROGENASE 46 576 IPR045024 GO:0003954|GO:0006116
Mepo2g03359 576 ProSiteProfiles EF-hand calcium-binding domain profile. 374 409 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g03359 Mepo-Chr2 43239736 43244486 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g03359 1 576 EF-hand Containing Proteins AT4G05020 70.418 0.0 877
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g03359 K03885 - gmx:100809915 1033.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g03359 2 43239736 43244486 Mepo6g00346 6 3565960 3570588 PCT