Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g03321 ATGGACAGCACAGATTCATCATCTTGCTCTCCACACCCCCACCTACCACCAGGGTTCCGATTCCATCCAACAGATGAAGAACTCGTTGTTCACTACCTCAAAAGAAAAGCTGATTCAGCACCTCTTCCAGTAGCCATCATAGCAGAAATTGATCTCTACAAATTCGACCCATGGGAACTCCCAAGTAAAGCAAGTTTTGGGGAACAAGAGTGGTACTTTTTCAGCCCAAGGGATAGAAAATACCCAAATGGGGCCAGGCCCAATAGGGCTGCAACTTCTGGGTATTGGAAAGCTACTGGAACTGATAAGCCTATATTAACATCTGACGGGAATCAGAAAGTTGGAGTTAAGAAAGCACTTGTTTTTTATGGAGGAAAGCCACCAAAAGGAGTTAAAACTAATTGGATTATGCATGAGTATAGGCTCATCACTGATCACAATAATCATAATTCTTATAATGCAACTTCAAAAACTCCTCCTCTGCCTTCTGATCATTCTCCAAACAATAACAAGAAGAATTCTCTAAGGCTTGATGATTGGGTTTTGTGCCGAATATACAAGAAAAGCAACAGTAGCACCATGCCAAGGCCACTCCTAATGGATCAATACGATGATCAAACCTATAATATGCAACAAAACTCCAAACATTCATCATCAAGAAGCACAAGTTATGGACTTGAAAATGATGACAATTTCTTCGATGGAATCTTAGCAACTGATCACGGAATGCAAAATGGTTGTGACATAAATTCAAAAGGTGATAACAATAATAATGAACCATTCCCTATGAAACGTGCACTAAATGCATCATCACAGTTTTGGAATGAAACAGGTTCACCAGGCTCATCTTCTTCAACCAAACGGTTTCATGGAGATCTTAATAGTGGAATAAGCAGTAATGCTGAGGAAAATAATTCATTTGTTTCACTGCTTAGCCAGCTTCCACCAAGCACAACTTTTCATCAAAATTCAATTCTTGAGTCAGTTGAAGATGGTGTAATGAGGCAACAATTTCAACTTCCGGACATAAATTGGAACTAG 1041 0.3958 MDSTDSSSCSPHPHLPPGFRFHPTDEELVVHYLKRKADSAPLPVAIIAEIDLYKFDPWELPSKASFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPILTSDGNQKVGVKKALVFYGGKPPKGVKTNWIMHEYRLITDHNNHNSYNATSKTPPLPSDHSPNNNKKNSLRLDDWVLCRIYKKSNSSTMPRPLLMDQYDDQTYNMQQNSKHSSSRSTSYGLENDDNFFDGILATDHGMQNGCDINSKGDNNNNEPFPMKRALNASSQFWNETGSPGSSSSTKRFHGDLNSGISSNAEENNSFVSLLSQLPPSTTFHQNSILESVEDGVMRQQFQLPDINWN 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g03321 346 Pfam No apical meristem (NAM) protein 16 142 IPR003441 GO:0003677|GO:0006355
Mepo2g03321 346 MobiDBLite consensus disorder prediction 148 173 - -
Mepo2g03321 346 MobiDBLite consensus disorder prediction 1 20 - -
Mepo2g03321 346 Gene3D NAC domain 24 193 IPR036093 GO:0003677|GO:0006355
Mepo2g03321 346 ProSiteProfiles NAC domain profile. 15 188 IPR003441 GO:0003677|GO:0006355
Mepo2g03321 346 PANTHER NAC TRANSCRIPTION FACTOR 56 15 214 - -
Mepo2g03321 346 FunFam NAC transcription factor 56 24 193 - -
Mepo2g03321 346 SUPERFAMILY NAC domain 10 188 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g03321 Mepo-Chr2 42880986 42883050 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g03321 1 346 NAC Transcription Factor Family AT1G61110 54.294 3.62e-115 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mepo2g03321 NAM 6.1e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g03321 - - gmx:100797132 491.5