LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo2g03317	ATGGCTTACAGACGTTGCCTCTTACAAAGAGGCAAACGCATAGATCGAAGGTCCCATCCTTCTTTCACCTATCTTCTCCACACCGACGATGAAACCAAATCAGATGATAAACCATCTTCAACAGGAATCAGTAACAATTTCACCCAATCAAGATCCTTTCGAACCTCTCTTAACGGAGGATCAATCGGTTTTTTCTCATCTTCTCAACATAGAACACACCTTTCACCGTTCGCTGGATATAATTTCTGCCGAAATATGTCATCAATGGATCAGAGTTCTGATAAGATTACCGTAATGACTGATGTAGCTGATGTTTTCACTGATACCACCGTGGAGGCTGTGACTTCTCAGGCCGCTTCTGGTGTTTGCGAAGTTGCCATTGCTGCTGCTGATTCTTATTTGCCTGTTCAAGCCTTGCAGTATGTTATAGATGCTGTTCATTTATACACTGGTCTAGACTGGTGGGCGGCCATAGCTCTAACAACTCTCGTGATTCGAACTGCAACTGTTCCACTCTTAGTAAATCAACTCAAGGCCACTTCTAAGCTTACGCTTATGAGGCCTCACTTGGAACAGATAAAGGAAGAGATGGACGGGAAGACATCTGATCCCGCGGCTGTTGCTCAAGGTAAGGAGAGGATGAATAAGCTATTCAAAGAATATGGTGTGACTCCTTTTACGCCATTGAAGGGGCTCTTTATTCAAGGTCCTGTTTTCATTAGTTTTTTTCTTGCGATAACAAACATGGCTGAAAAAATGCCATCGTTCAAACACGGTGGAGCTTTCTGGTTTACTGATCTCACAACTCCAGATGCCTTGTACATTTTTCCAGTTTTGACTGCTTTGTCATTCTTAATAGTAGTAGAGACTAATATGCAAGAAGGAATGGAAGGAAATCCTATGGGTAACACCATGAAAAAGTTCTCGAGGGTTCTTGCTCTTCTTTCAGTTCCTTTCACTCTGAGTTTTCCAAAGGCAATTTTTTGTTACTGGATTACATCGAATTTGTTTTCATTGACGTATGGAATGGTGCTTAGAACTCCTGGTGTAAAGAAAACTTTGGGTATTCCTGATTTACCTCCTGCAGAACCCACCAGTTCTCCGAAATCTCCCTTCTCTATATTTCCAGCACTAAAACAACGTAAAGATAAAAGCTCACTGCCAATTGAATCACCAAAACAAATAAAAAATCAAAGCTCATTGCCAGTTGAAACACCAAAACAACCAAACAAAAAGATATCTTCTATTAGTCAAAGGATTAGAAGCTTAGAAAAACACGTTAAAGGAAGAAAGATAAGCAAGAAATGA	1308	0.406	MAYRRCLLQRGKRIDRRSHPSFTYLLHTDDETKSDDKPSSTGISNNFTQSRSFRTSLNGGSIGFFSSSQHRTHLSPFAGYNFCRNMSSMDQSSDKITVMTDVADVFTDTTVEAVTSQAASGVCEVAIAAADSYLPVQALQYVIDAVHLYTGLDWWAAIALTTLVIRTATVPLLVNQLKATSKLTLMRPHLEQIKEEMDGKTSDPAAVAQGKERMNKLFKEYGVTPFTPLKGLFIQGPVFISFFLAITNMAEKMPSFKHGGAFWFTDLTTPDALYIFPVLTALSFLIVVETNMQEGMEGNPMGNTMKKFSRVLALLSVPFTLSFPKAIFCYWITSNLFSLTYGMVLRTPGVKKTLGIPDLPPAEPTSSPKSPFSIFPALKQRKDKSSLPIESPKQIKNQSSLPVETPKQPNKKISSISQRIRSLEKHVKGRKISKK	435

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo2g03317	435	Pfam	60Kd inner membrane protein	154	344	IPR028055	-
	Mepo2g03317	435	CDD	5TM_Oxa1-like	151	348	-	-
	Mepo2g03317	435	MobiDBLite	consensus disorder prediction	381	435	-	-
	Mepo2g03317	435	PANTHER	OXA1	105	396	IPR001708	GO:0016020\|GO:0032977
	Mepo2g03317	435	MobiDBLite	consensus disorder prediction	390	417	-	-
	Mepo2g03317	435	NCBIfam	membrane protein insertase YidC	154	343	IPR028055	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mepo2g03317	Mepo-Chr2	42826426	42836059	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mepo2g03317	44	352	Chloroplast and Mitochondria Gene Families	AT2G28800	24.149	7.33e-11	62.0

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo2g03317	K03217		-	gmx:100817052	561.992