Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g03293 ATGTACGTTGCTTCTTCCATGCGCAAGTCTTTTAAGGATTCCTTAAAACTTCTCGAAGCTGATATTCAACACGCCAATACTCTGGCGTCAGATTTCCCTAGGGAGTATGATGGTGCATGTCTTCAGATGAGAATGTCATACAGTCCAGCTGCAACCTTGTTTCTCTTTTTTGTTCAATGGACTGATTGCCATCTTGCTGGAGCTCTTGGATTGTTAAGAATCCTCATTTACAAGGTGTATGTGGATGGAACAACCACCATGTCTACCCATGAAAGAAAAGCAAGTATAAGGGAATTCTATGCTGTCATTTATCCCTCTTTATTGCAACTTGAGAAAGGTGTCACTGACTCTGAAGATAAAAGGCAAAAGGCCGTATGCATGGAGAGGTATCGTAGAAGAGATGATGACTGTAGGCAATCTTCTGACATAGATATTGAAAGAGACGATGAATGTGGGATATGCATGGAGATGAATAGTAAAATTGTGTTGCCTAACTGTAATCATGCTATGTGCCTCAAGTGTTACCGAGAATGGCGAACGAGATCCCAGTCGTGCCCATTTTGCCGTGACAGCCTGAAGAGAGTGAACTCAGGGGATCTCTGGGTATACACTGATAGAAGGGATGTGGTTGATATGGCAACAGTGACAAGGGAGAATCTCAGAAGGCTTTTCATGCACATAGATAAGTTGCCTTTGATTGTTCCAGACTCCATCTTTGACGCGTATGACTCTCACATAAGGTAA 744 0.4261 MYVASSMRKSFKDSLKLLEADIQHANTLASDFPREYDGACLQMRMSYSPAATLFLFFVQWTDCHLAGALGLLRILIYKVYVDGTTTMSTHERKASIREFYAVIYPSLLQLEKGVTDSEDKRQKAVCMERYRRRDDDCRQSSDIDIERDDECGICMEMNSKIVLPNCNHAMCLKCYREWRTRSQSCPFCRDSLKRVNSGDLWVYTDRRDVVDMATVTRENLRRLFMHIDKLPLIVPDSIFDAYDSHIR 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g03293 247 SUPERFAMILY RING/U-box 141 194 - -
Mepo2g03293 247 ProSiteProfiles Zinc finger RING-type profile. 151 189 IPR001841 -
Mepo2g03293 247 Pfam Zinc finger, C3HC4 type (RING finger) 148 194 - -
Mepo2g03293 247 ProSitePatterns Zinc finger RING-type signature. 166 175 IPR017907 -
Mepo2g03293 247 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 141 198 IPR013083 -
Mepo2g03293 247 PANTHER RING FINGER PROTEIN 41, 151 9 245 - -
Mepo2g03293 247 SMART ring_2 151 188 IPR001841 -
Mepo2g03293 247 FunFam RING/U-box superfamily protein 124 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g03293 Mepo-Chr2 42636133 42639834 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g03293 116 192 C3H Transcription Factor Family AT5G41350 30.864 1.97e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g03293 K25840 - gmx:100777318 453.751