Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g03287 ATGAGTGGAAATGTGATGGAGCTAAACTTTGGTTCATTAGACCAATTTTCTTCTGATCAAAATGGAGTGTCCCTTAAGCCATTAAGGTGCCCTGCACCATTTCTATTGAAGACCTATGATTTGGTGGAACAAGGTAGTGAAGATGAAGATGGTATAAAAATTGTGTCATGGAATGAAGAAGGAAATGGTTTTGTTGTGTGGTCTCCAGCTGAATTCTCAGAGCTTACCTTGCCTAGATATTTCAAGCACAACAATTTCTCTAGCTTTATTCGACAACTCAATACATATGGGTTTAAGAAAATATCATCTAAAAGATGGGAATTCCAGCATGAGAAATTTCAAAAGGGTTGCAGGCACATGTTGGTTGAAATCAGTAGGAAAAAATGTGAGCCCAGTGTGTTTCCTCAATATCTCAAGTCTTGTTCAGAGGAAAATGCAATGACTAATAATTCATCACTTGAAGAAGACAATAACAATCATGAACTACTCATGGAGGAGAACAAGAACCTAAAGAAGGAGAGATTAGAGTTGCAAATGCAAATAGCTGAATGCAAGGCACTTGAAATGAAGTTGTTGGAGTGTCTCTCTCAGTGTATGGATAACCGCCAAAATAAAGTTAGGAGACTATGTTAA 633 0.3744 MSGNVMELNFGSLDQFSSDQNGVSLKPLRCPAPFLLKTYDLVEQGSEDEDGIKIVSWNEEGNGFVVWSPAEFSELTLPRYFKHNNFSSFIRQLNTYGFKKISSKRWEFQHEKFQKGCRHMLVEISRKKCEPSVFPQYLKSCSEENAMTNNSSLEEDNNNHELLMEENKNLKKERLELQMQIAECKALEMKLLECLSQCMDNRQNKVRRLC 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g03287 210 SMART hsfneu3 30 127 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mepo2g03287 210 ProSitePatterns HSF-type DNA-binding domain signature. 77 101 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mepo2g03287 210 SUPERFAMILY "Winged helix" DNA-binding domain 31 127 IPR036390 -
Mepo2g03287 210 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 24 200 IPR027725 -
Mepo2g03287 210 Gene3D - 28 128 IPR036388 -
Mepo2g03287 210 Pfam HSF-type DNA-binding 34 127 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mepo2g03287 210 PRINTS Heat shock factor (HSF) domain signature 89 101 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mepo2g03287 210 PRINTS Heat shock factor (HSF) domain signature 76 88 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mepo2g03287 210 PRINTS Heat shock factor (HSF) domain signature 38 61 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mepo2g03287 210 FunFam Heat stress transcription factor A-6b 27 128 - -
Mepo2g03287 210 Coils Coil 150 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g03287 Mepo-Chr2 42590663 42592320 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g03287 30 187 HSF AT5G62020 36.957 1.14e-38 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Mepo2g03287 HSF_DNA-bind 6.5e-30 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g03287 K09419 - gmx:100789792 281.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g03287 2 42590663 42592320 Mepo2g03287 2 42590663 42592320 ECH