Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g03286 ATGGCGGGTCGATTCTTTGGATCTTCTTCCGCTTCGATCGACATGATCGTCACCAATACGCCATCTCAGGAACTCGCTCTAACCAACCTCGCCTTCATCTCCGCCTCCGATCTACCTAAATTCGCCGTCCCTGGTCACGATAATCTATACCTCGCTTCCATCGGCGATTCCTTCAATACAGCTCATGAAAGCATACGCGGAGGCCATATTGCGTTGAATTCAATTCAACGTCGATGTGCAAGAGTTTCTGCTGCCGAATCTGTACCTGTGACGCGATTTGTGCCGCCTGAAAATTTCAACCTGGCAGTGCTGCAGCTTGAATTGGAATTCATTAAAAAGGCTGGAAACAAAAATGAACAGATTGATGCTATAGTACTTGCCAAGCAATTACGAAAGAGGTTTATAAAGCAGGTAATGACAGCAGGGCAGAAAGTGTTATTTGAGCATCAGGGAAATAATTATAGCTTTACAGTCAGTCAAGTTACTGTTGAGGGCCAACAAAGGTCTAGTTCTATTGACCGAGGGATGATTTCAGAGGACACATTCATAGCTTTTGAAGCATCACGTGATAGTGGAATTAAGATTATCAATCAGCGCGAATCTACTACTAGCAACATTTTTAAGCAGAAAGAATTTAACCTTGAGTCTCTGGGTATTGGTGGCCTGGGTGCAGAGTTTGCAGATATATTTCGAAGAGCTTTTGCATCTCGTGTTTTCCCTCCCCATGTGACATCTAAATTAGGGATCAAGCATGTGAAGGGCATGCTGCTTTATGGTCCTCCTGGAACTGGAAAGACTCTTATGGCACGTCAAATTGGAAAAATTTTGAATGGCAAGGAACCAAAGATTGTAAATGGCCCTGAAGTTTTGAGCAAATTTGTGGGTGAAACTGAAAAGAATGTGAGGGACCTTTTTGCTGATGCTGAACAGGATCAGAGGAACCTAGGTGATGAAAGTGATTTGCATGTTATTATATTTGATGAAATTGATGCTATCTGTAAGTCCAGAGGCTCCACTAAAGATGGTACGGGGGTTCATGATAGCATTGTGAACCAGCTTCTTACCAAGATAGATGGTGTGGAATCACTAAACAATGTTTTGCTTATTGGAATGACTAACAGAAGGGACATGCTTGACGAAGCACTCTTGCGACCAGGGAGATTGGAAGTCCAGGTTGAGATAAGCCTCCCTGATGAAAATGGTCGATTGCAAATTCTTCAAATTCACACTAACAAGATGAAAGAGAATTCTTTTCTAGCTCCTGATATAAACCTTCAAGAGCTTGCTGCTCGAACCAAAAACTACAGTGGTGCGGAACTTGAAGGTGTTGTGAAAAGTGCTGTCTCATATGCCTTAAATAGACAATTGAGCCTAGATGACCTCACTAAACCAGTGGAGGAGGAAAATATTAAGGTTACGATGGATGACTTTTTGAATGCACTCCATGAAGTTATTCCTGCATTTGGAGCTTCCACGGACGATCTTGAGCGATGCAGACTCCATGGCATGGTGGAGTGTGGTGATCGACATAAGCACATTTATCAGAGGGCAATGCTAATTGCAGAGCAAGTTAAAGTGAGCAAAGGAAGCCCCCTTGTTACTTGTCTTCTGGAAGGTTCTCGTGGCAGTGGTAAAACCGCAATTGGAGCTACTGTAGGCATTGATAGTGACTTCGCATATGTCAAGATAATTTCAGCTGAAACAATGATTGGTCTACATGAGAGCACTAAATGTGCCCAGATTATTAAGGTTTTTGAGGATGCATACAAGTCACCTTTGAGTGTCATTGTTCTCGATGACATTGAGAGATTATTGGAGTATGTGGCCATTGGTCCTCGTTTTTCAAACATAATTTCGCAGACATTGCTGGTCCTGCTCAAACGGCTTCCTCCAAAGGGGAAAAAACTCATGGTTATTGGAACAACAAGTGAAGTGGACTTCTTGGAGTCACTTGGATTTGTTGATACATTCTCCGTAACTTACAATGTTCCTACCTTGAACAAACAAGACGCGAAGAAGGTCCTAGAACAGTTGAATGTTTTTGCTGATGAAGATATTGATTCTGCCGCAGAGGCATTGGATAATATGCCTATCAAGAAGTTATACATGTTGATTGAGATGGCAGCGCAAGGTGCGCATGGTGGATCTGCAGAAGCTATCTATTCTGGAAAAGAGAAGATTAATATATCTCATTTCTACGATTGCCTTGGGGATGTTGTCAGATTAGTATAG 2232 0.4243 MAGRFFGSSSASIDMIVTNTPSQELALTNLAFISASDLPKFAVPGHDNLYLASIGDSFNTAHESIRGGHIALNSIQRRCARVSAAESVPVTRFVPPENFNLAVLQLELEFIKKAGNKNEQIDAIVLAKQLRKRFIKQVMTAGQKVLFEHQGNNYSFTVSQVTVEGQQRSSSIDRGMISEDTFIAFEASRDSGIKIINQRESTTSNIFKQKEFNLESLGIGGLGAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKILNGKEPKIVNGPEVLSKFVGETEKNVRDLFADAEQDQRNLGDESDLHVIIFDEIDAICKSRGSTKDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRRDMLDEALLRPGRLEVQVEISLPDENGRLQILQIHTNKMKENSFLAPDINLQELAARTKNYSGAELEGVVKSAVSYALNRQLSLDDLTKPVEEENIKVTMDDFLNALHEVIPAFGASTDDLERCRLHGMVECGDRHKHIYQRAMLIAEQVKVSKGSPLVTCLLEGSRGSGKTAIGATVGIDSDFAYVKIISAETMIGLHESTKCAQIIKVFEDAYKSPLSVIVLDDIERLLEYVAIGPRFSNIISQTLLVLLKRLPPKGKKLMVIGTTSEVDFLESLGFVDTFSVTYNVPTLNKQDAKKVLEQLNVFADEDIDSAAEALDNMPIKKLYMLIEMAAQGAHGGSAEAIYSGKEKINISHFYDCLGDVVRLV 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g03286 743 Gene3D - 96 195 - -
Mepo2g03286 743 Gene3D - 9 93 - -
Mepo2g03286 743 SUPERFAMILY Cdc48 domain 2-like 96 200 IPR029067 -
Mepo2g03286 743 Gene3D - 397 484 - -
Mepo2g03286 743 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 230 494 IPR027417 -
Mepo2g03286 743 SUPERFAMILY ADC-like 14 96 IPR009010 -
Mepo2g03286 743 Gene3D - 205 396 IPR027417 -
Mepo2g03286 743 FunFam Vesicle-fusing ATPase 97 195 - -
Mepo2g03286 743 FunFam Vesicle-fusing ATPase protein 12 93 - -
Mepo2g03286 743 FunFam vesicle-fusing ATPase isoform X1 493 664 - -
Mepo2g03286 743 CDD RecA-like_NSF-SEC18_r1-like 218 394 - -
Mepo2g03286 743 PANTHER VESICULAR-FUSION PROTEIN NSF 13 741 IPR039812 GO:0016887|GO:0035494
Mepo2g03286 743 FunFam Vesicle-fusing ATPase 397 484 - -
Mepo2g03286 743 Pfam AAA+ lid domain 422 477 IPR041569 -
Mepo2g03286 743 Pfam ATPase family associated with various cellular activities (AAA) 255 395 IPR003959 GO:0005524|GO:0016887
Mepo2g03286 743 Pfam ATPase family associated with various cellular activities (AAA) 536 650 IPR003959 GO:0005524|GO:0016887
Mepo2g03286 743 SMART AAA_5 251 398 IPR003593 GO:0016887
Mepo2g03286 743 SMART AAA_5 531 667 IPR003593 GO:0016887
Mepo2g03286 743 Gene3D - 493 664 IPR027417 -
Mepo2g03286 743 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 511 741 IPR027417 -
Mepo2g03286 743 Pfam Cell division protein 48 (CDC48), domain 2 120 184 IPR004201 -
Mepo2g03286 743 ProSitePatterns AAA-protein family signature. 366 384 IPR003960 GO:0005524|GO:0016887
Mepo2g03286 743 FunFam Vesicular-fusion ATPase SEC18 207 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g03286 Mepo-Chr2 42559653 42574662 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g03286 219 470 Calmodulin-binding Proteins AT3G56690 33.071 1.85e-29 123