Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g03282 ATGATGCAAAGCCAACAACAAGTAAACAAAGAAGACGACGACGGCCCGCCACCCGGTTGGCAACCTATCCCCACACCGCAGCGCCCACGGCCACCGCCGCCAGTCCCATCCGGTTTTGCTCAAATGGTTTGTGGTTCTTGTCGCCGCCTGCTTTCGTATCCACCAGGTGCCAAACATGTCAAATGTTCATGCTGTCAGACGGTCAACATTGTATTAGAAGCTGATCAGGTTGGACAAGTTAAGTGTGGGAGTTGTGCAGTATTGCTAATGTACCCATACGGTGCTCCACAAGTTAGGTGTTCATCATGCCGGTTTGTGACAGAAATCGGGGCAGACAACAAGCGGCCTCCATGGTCTGTACAACAAAGTAAACCAACTCCTCCCAAAGCTGGTTGTTAG 399 0.5138 MMQSQQQVNKEDDDGPPPGWQPIPTPQRPRPPPPVPSGFAQMVCGSCRRLLSYPPGAKHVKCSCCQTVNIVLEADQVGQVKCGSCAVLLMYPYGAPQVRCSSCRFVTEIGADNKRPPWSVQQSKPTPPKAGC 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g03282 132 MobiDBLite consensus disorder prediction 17 37 - -
Mepo2g03282 132 MobiDBLite consensus disorder prediction 1 37 - -
Mepo2g03282 132 Pfam LSD1 zinc finger 82 106 IPR005735 -
Mepo2g03282 132 Pfam LSD1 zinc finger 44 68 IPR005735 -
Mepo2g03282 132 PANTHER PROTEIN LSD1 14 128 IPR040319 -
Mepo2g03282 132 NCBIfam zinc finger domain, LSD1 subclass 79 107 IPR005735 -
Mepo2g03282 132 NCBIfam zinc finger domain, LSD1 subclass 41 71 IPR005735 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-LSD Mepo2g03282 zf-LSD1 5e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g03282 - - gmx:100780865 213.001