Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mepo2g03259 | ATGAAGTTTAACGTTGCGAATCCAACCACTGGATGTCAGAAGAAGCTTGAAATTGATGATGACATGAAGCTTCGTGCTTTCTGGGACAAGAGGATCTCACAGGAAGTCCTTGGCGATGCCTTAGGAGAGGAATTTAAAGGCTACGTCTTCAAAATTACTGGTGGGTGTGACAAACAAGGATTCCCAATGAAGCAGGGAGTGTTGACACCTGGCCGTGTTAGGCTCTTGCTCCATAGAGGAACTCCTTGTTTCCGTGGACATGGAAGGCGCAATGGAGAGCGTAGAAGGAAGTCTGTTCGTGGATGCATTGTCAGCCCTGACCTCTCTGTTTTGAACTTGGTTATTGTGAAGAAAGGTGATAATGATCTTCCAGGGCTTACTGATGTTGAGAAGCCAAGGATGAGAGGTCCTAAGAGAGCATCCAAAATCCGTAAGCTGTTCAACCTGTCGAAGGATGATGATGTGCGAAAATATGTTAACACCTACCGTAGAACTTTCACCACCAAGGATGGGAAGAAGGTTAGCAAAGCTCCAAAGATACAGCGATTGGTCACTCCTTTGACACTCCAAAGGAAGCGAGCAAGAATTGCAGACAAGAAGAAGAGAATTGCTAAGGCAAAATCAGAGGCAGCAGATTATCAGAAACTCCTTGCATCCAGATTGAAGGAGCAGAGGGAACGCCGAAGTGAGAGCTTGGCTAAGAAAAGGTCCAGACTATCCAGTGCTAAGCCATCTGCCACAGCATAA | 747 | 0.4618 | MKFNVANPTTGCQKKLEIDDDMKLRAFWDKRISQEVLGDALGEEFKGYVFKITGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGHGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGDNDLPGLTDVEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTTKDGKKVSKAPKIQRLVTPLTLQRKRARIADKKKRIAKAKSEAADYQKLLASRLKEQRERRSESLAKKRSRLSSAKPSATA | 248 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mepo2g03259 | 248 | Coils | Coil | 189 | 216 | - | - | |
Mepo2g03259 | 248 | PANTHER | 40S RIBOSOMAL PROTEIN S6 | 1 | 240 | IPR001377 | GO:0003735|GO:0005840|GO:0006412 | |
Mepo2g03259 | 248 | SMART | Ribosomal_S6e_2 | 1 | 128 | IPR001377 | GO:0003735|GO:0005840|GO:0006412 | |
Mepo2g03259 | 248 | ProSitePatterns | Ribosomal protein S6e signature. | 52 | 63 | IPR018282 | GO:0003735|GO:0005840|GO:0006412 | |
Mepo2g03259 | 248 | Pfam | Ribosomal protein S6e | 1 | 128 | IPR001377 | GO:0003735|GO:0005840|GO:0006412 | |
Mepo2g03259 | 248 | PIRSF | RPS6e | 1 | 248 | IPR014401 | GO:0003735|GO:0005840|GO:0006412 | |
Mepo2g03259 | 248 | Gene3D | - | 133 | 234 | - | - | |
Mepo2g03259 | 248 | MobiDBLite | consensus disorder prediction | 220 | 237 | - | - | |
Mepo2g03259 | 248 | MobiDBLite | consensus disorder prediction | 220 | 248 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mepo2g03259 | Mepo-Chr2 | 42234918 | 42237727 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mepo2g03259 | 1 | 247 | Cytoplasmic Ribosomal Protein Gene Family | AT5G10360 | 73.896 | 7.44e-121 | 340 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mepo2g03259 | K02991 | - | gmx:100786559 | 434.106 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Mepo2g03259 | 2 | 42234918 | 42237727 | Mepo6g00451 | 6 | 4645692 | 4648729 | PCT |