Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g03257 ATGTTTGGTAACTGTGTTGATGAGAAAACGGTAATCACTTGTAACAAATTGACACAGGCTGAGATAGATGATCATAAGGTTTCAATGGCTTCTTCAAGTGGTGGTGGAAATAGGGTTATGGAAAAACCAGGTCAAGAGCTTCTTCAACAGCAACAACAAGCTTTAAGGTGTCCACGTTGTGATTCATCAAACACTAAATTCTGTTACTACAATAACTACAGCTTATCACAACCAAGACACTTCTGCAAAGCCTGTAAAAGATATTGGACAAGAGGTGGAACACTTAGAAACGTTCCTGTTGGTGGTGGTTGCAGAAAAAACAAACGTCTTAAACGACCAAATCACTCTTCTTCAAACATTGATACTGCTACTGCTTCTCCTTCTTCTTCAACTCCTACTAGTGCTAATTCAAACCCTCCTTCTCAACAACAACAACAACACCATAGTTTTGATATTGCTTCTACCTCAAACCATATCAATTCTCTTCTTTATGGTAACTCTTCTTGTCATGATGTGATGAACTTTCCTTTTGCAACAAGGTTCAATTCTACTAGAGTTTCAAGTTCTTCTGGTTATGATCATCTTCAGCAGCAGCAGCCTCAGGTGAATGGTCTTGGATTAGGTTTTTCAACTGGGGTAGTTAATGTTAATCATCATGATGATTACAGAAATGGATTTGGTTCAAATAATAACAACTACAGTTCCATCTTTGGTTCTTCTTCTACTTCAACTAATGATAACTCCATGGCCTCTACTACTCCAGTTATGGCTTCTCTACTTAACTCTACACTACTGCAACAGAAATTCATGAGTACAGCTGGTGCTGGTGCTGGTGGAATGAAAGGTGGTGATCCTTTTCATCATGAGGCTGGAATGATGGATTCAAAAGAAGTGAAATTAGGTGAAGGACTACAAAATAGGTTGGATCAGTGGAGTAATAATATGAATGGTAATGGTGGTGTTGCTTTTCAAAACCAGATGGAGAATATGGGTTTGTCGGATTCTTCTTCTCTTTATTGGAATAACAACAACACCAACAACAACAACACTGCAGCAACAGGTTTGAGTAGTGTTTGGAATACTGATCATCAACCTAATAATATTGGTCATAATTCAGTTACTTCTCTGATCTAG 1134 0.381 MFGNCVDEKTVITCNKLTQAEIDDHKVSMASSSGGGNRVMEKPGQELLQQQQQALRCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKNKRLKRPNHSSSNIDTATASPSSSTPTSANSNPPSQQQQQHHSFDIASTSNHINSLLYGNSSCHDVMNFPFATRFNSTRVSSSSGYDHLQQQQPQVNGLGLGFSTGVVNVNHHDDYRNGFGSNNNNYSSIFGSSSTSTNDNSMASTTPVMASLLNSTLLQQKFMSTAGAGAGGMKGGDPFHHEAGMMDSKEVKLGEGLQNRLDQWSNNMNGNGGVAFQNQMENMGLSDSSSLYWNNNNTNNNNTAATGLSSVWNTDHQPNNIGHNSVTSLI 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g03257 377 ProSiteProfiles Zinc finger Dof-type profile. 55 109 IPR003851 GO:0003677|GO:0006355
Mepo2g03257 377 Pfam Dof domain, zinc finger 53 109 IPR003851 GO:0003677|GO:0006355
Mepo2g03257 377 ProSitePatterns Zinc finger Dof-type signature. 57 93 IPR003851 GO:0003677|GO:0006355
Mepo2g03257 377 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 43 252 IPR045174 GO:0003700|GO:0006355
Mepo2g03257 377 MobiDBLite consensus disorder prediction 116 149 - -
Mepo2g03257 377 MobiDBLite consensus disorder prediction 100 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g03257 Mepo-Chr2 42219531 42221697 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g03257 24 271 C2C2-Dof Transcription Factor Family AT5G65590 38.132 6.67e-37 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mepo2g03257 zf-Dof 3.2e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g03257 - - psat:127105320 458.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g03257 2 42219531 42221697 Mepo2g03257 2 42219531 42221697 ECH
Mepo2g03257 2 42219531 42221697 Mepo6g00454 6 4662282 4663428 PCT