Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g03253 ATGCCGGCACAGAAGCGTTCTTTCGAAGAAGCTCTCGAAGAGAATGAGATAAACAACACTTCGCAACCTAACGATGAACTCGAATCGGATCAAAGACATTCATCTGAAAACGACGAAGAAGATGATGAAGAAGAAGAAGATGAAGATGACGACGAAGAATATGTGGCTATAAAATTGTCAGATGTACGCAAAGAAGTTCAGTGTCCTATCTGCCTCGGCATCATTCGAAAAACAAGAACCGTAATGGAGTGCTTGCATCGCTTTTGCAGAGAGTGCATAGATAAATCCATGCGCCTAGGTAACAATGAATGTCCTGCTTGCCGAACACATTGTGCTAGCCGACGCTCACTGAGAGATGACCCAAACTATGATGCTTTGATTGCTGCTATCTATCCAGATATTGACAAGTATGAGGAAGAGGAATTGGCTTTGCATGAGGATGAGATGACTCGGCATAAGCAGAGTTCTATCTCTTTTATCAAGTTCCAAGCATCCATTGCCCAAACGCTACAACGGCAATCAGAAGCATTGAGTAAGAAACGAAATGCCAAAGCAACAGCAGCGGCTTTTGTTAGGAGATCAAAAGGCAATTATCGAACTTCACATCTGAGGCGTCGAAGAAACATTAGAAATGCTGGCGACTTTCAGGTATCAAGTGACAACAATGGTATGAATGATAATGATGGGGAAAAGGACTCATCTTCAGACGATGGGCAGACAGAAACCCAGCCAAGAAGATGCAAAAGAGGCGCTGAACAAGAAACTCAATTTCCTCGGCGTTCTGCCTCTACTGATCCAGATGGAATTGGTGATGAAACTACTCCAGAAGTACATAGAGAAATCATAAGTGCATCTGGTACACTTTCCTGGGGGAAAAATGGTCACCGGAGTCACAGTCGCGTCAATGGAAAGAATGCAAAAAACAACCGCATCTCCAAATTGGTTGAACATCTCAGTAGCTTGGCAGCAAATGGTTATGAGCTGCCTGTCTTTCTCAAGCTTGTCTCGTTTGATGAGCAAAGAATGCCAAATTTGGAGGAGTCATGCATTACTTGCAAGCCTACTATGTCAGTCAAGGAACTTTGCAAGCATGTTGCAAATGAAACTGCACTGCCTGCCAATGAAGTTGAATTGTTTCTGCTACTAAAGCCACGAGCTAGCATTGTAGGAGGTGAAAGTACCATTGGTCCAGACAGAGATAATTTACGTGTTCTAGAAGACCAAGAAACATTGGCTGAATTGCTGGGAGATTATGAAAATACCAGCTATGGTTATCTGGTCATGGCTTACAAGAGGAAGTTGCAGAATTCAGACATTGTTGGGTTAAGCTGA 1332 0.4317 MPAQKRSFEEALEENEINNTSQPNDELESDQRHSSENDEEDDEEEEDEDDDEEYVAIKLSDVRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALIAAIYPDIDKYEEEELALHEDEMTRHKQSSISFIKFQASIAQTLQRQSEALSKKRNAKATAAAFVRRSKGNYRTSHLRRRRNIRNAGDFQVSSDNNGMNDNDGEKDSSSDDGQTETQPRRCKRGAEQETQFPRRSASTDPDGIGDETTPEVHREIISASGTLSWGKNGHRSHSRVNGKNAKNNRISKLVEHLSSLAANGYELPVFLKLVSFDEQRMPNLEESCITCKPTMSVKELCKHVANETALPANEVELFLLLKPRASIVGGESTIGPDRDNLRVLEDQETLAELLGDYENTSYGYLVMAYKRKLQNSDIVGLS 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g03253 443 SMART ring_2 68 107 IPR001841 -
Mepo2g03253 443 ProSiteProfiles Zinc finger RING-type profile. 68 108 IPR001841 -
Mepo2g03253 443 PANTHER OS11G0578200 PROTEIN 16 435 IPR044592 -
Mepo2g03253 443 MobiDBLite consensus disorder prediction 1 52 - -
Mepo2g03253 443 Pfam Zinc finger, C3HC4 type (RING finger) 67 107 - -
Mepo2g03253 443 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 13 137 IPR013083 -
Mepo2g03253 443 CDD RING-HC_RING1-like 65 130 - -
Mepo2g03253 443 ProSitePatterns Zinc finger RING-type signature. 84 93 IPR017907 -
Mepo2g03253 443 MobiDBLite consensus disorder prediction 225 255 - -
Mepo2g03253 443 MobiDBLite consensus disorder prediction 177 305 - -
Mepo2g03253 443 MobiDBLite consensus disorder prediction 35 52 - -
Mepo2g03253 443 SUPERFAMILY RING/U-box 67 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g03253 Mepo-Chr2 42138102 42142561 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g03253 61 131 C3H Transcription Factor Family AT3G23060 35.135 6.69e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g03253 K10695 - zju:107425269 441.425