Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g03230 ATGACATGGTGCAATGACTCAGATGATCAAGATAGGGGCATTGAACTAATAACATCTACTGTTATTCCTGGAACTAGCAATGAAAGTACTCTTGTTACAGATGATGACACAAAACCGACCGGAGTTCGAACCCTAACTTGCCCCTCATGTGGCCATAACATTGAATTCCAAGATCAGGGTGGAATCAATGAACTACCGGGTTTACCGGCCGGAGTGAAGTTTGATCCGAATGATCAAGAGATACTTCAGCATTTGGAAGCAAAGGTTTTGTTTGATGTGCCCAAACTTCATCCTCTTATTGATGAGTTCATACCAACACTTGAAGGAGAGAACGGAATCTGTTATACACATCCAGAAAAGCTACCAGGTGTAAAAAAAGATGGACAGATCCGGCACTTTTTTCACAGGCCATCTAAAGCATACACAACAGGAACAAGGAAAAGAAGAAAGGTTCAAACTGATGAAGAAGGAAGTGAGACAAGATGGCACAAAACAGGGAAAACAAGACCAGTTTTTATTGATGGTATTATGAAAGGTTTCAAGAAGATACTAGTCCTCTACACTAACTATGGAAGGCAAAAGAAGCCTGAGAAAACCAATTGGGTGATGCATCAATACCACCTTGGTAGTAATGAAGAAGAGAAAGATGGAGAATTAGTTGTTTCGAAGGTGTTTTACCAGACACAGCCTCGACAATGTGGTGGTAATAATTCCAATATTATCAAGGATGCTACTAGTTATGAAAATGGACTGATGATAAATCAAGGAAATGTCCAAGATGATAATGAAGCTCCTCCTATGGACTACTACAATCCTTTCATAAATTATGACCATGTTGCTCATAATTTGGAAAGCTCAGACTCCCAATTTATTCCAAACTTGGTTATGCAAGGTGGTGGCTCTTCCTTTATTCGATTGGCAATGGATGCAAACAAAGCTGGGTTGAACAGAAATTAG 957 0.3971 MTWCNDSDDQDRGIELITSTVIPGTSNESTLVTDDDTKPTGVRTLTCPSCGHNIEFQDQGGINELPGLPAGVKFDPNDQEILQHLEAKVLFDVPKLHPLIDEFIPTLEGENGICYTHPEKLPGVKKDGQIRHFFHRPSKAYTTGTRKRRKVQTDEEGSETRWHKTGKTRPVFIDGIMKGFKKILVLYTNYGRQKKPEKTNWVMHQYHLGSNEEEKDGELVVSKVFYQTQPRQCGGNNSNIIKDATSYENGLMINQGNVQDDNEAPPMDYYNPFINYDHVAHNLESSDSQFIPNLVMQGGGSSFIRLAMDANKAGLNRN 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g03230 318 MobiDBLite consensus disorder prediction 141 163 - -
Mepo2g03230 318 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 31 254 IPR044799 GO:0003700
Mepo2g03230 318 Gene3D NAC domain 77 231 IPR036093 GO:0003677|GO:0006355
Mepo2g03230 318 ProSiteProfiles NAC domain profile. 68 227 IPR003441 GO:0003677|GO:0006355
Mepo2g03230 318 FunFam NAC domain-containing protein 73 77 231 - -
Mepo2g03230 318 SUPERFAMILY NAC domain 64 227 IPR036093 GO:0003677|GO:0006355
Mepo2g03230 318 Pfam No apical meristem (NAM) protein 69 208 IPR003441 GO:0003677|GO:0006355
Mepo2g03230 318 MobiDBLite consensus disorder prediction 147 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g03230 Mepo-Chr2 41872475 41876384 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g03230 1 313 NAC Transcription Factor Family AT1G28470 58.232 7.82e-120 345
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mepo2g03230 NAM 6.5e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g03230 - - tpra:123916172 536.954