Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g03223 ATGATGGGTTTGATTGATCTCAACACTACTGAGGAAGATGAAACACCTTCTTCTGGTTCATCTTCAAGTACAAGCATAGGTAGTGTTGGTGCTGCTGGTTCTGGTTCTTCTGTGTGTTTGGAGCTATGGCATGCTTGTGCTGGTCCTATGATCTCTTTGCCAAAGAAAGGAAGTGTTGTTGTTTACTTCCCTCAAGGACACTTGGAACATTTTCATGATTTTCCGTTATCTTTTTCGGATAATATACCTTCTCATGTGTTCTGTCGTGTTGTTGATGTCAAGCTTCATGCTGAGGAAGGGAACGATGAGGTGTATTGTCAGGTGTTGTTAGTTCCTGAAAGTGAGCAAGTGCAACAAAAGTTGAGGGAAGGGGTAATTGATGGTGATGGTGATGGTGAAGGAGAGGATACTGATGCTGTTATGAAGTCAACAACACCTCACATGTTCTGCAAGACTCTTACTGCTTCTGATACTAGCACTCATGGTGGATTCTCTGTACCTCGTCGAGCAGCCGAAGATTGCTTTCCTCCCCTGGACTACTCTCAACAAAGACCTTCACAAGAGCTTGTGGCAAAGGATCTGCACGGCCAGGAATGGAAGTTTCGACATATATACAGAGGGCAGCCACGAAGGCATTTGCTTACAACTGGATGGAGTGCATTTGTTAACAAGAAGAAACTTGTATCTGGAGATGCAGTTCTGTTCCTCCGGGGAGAGGATGGCGAATTGAGATTAGGAATCCGAAGGGCAGTTCAATTAAAAAGTTGCAGTAACTTTTCATCTATCTTGGGCCAGCAATTGAATCTTGGTAGCCTTAGGGACATAGTTAATGCTTTATCTACTAGATGTGCCTTTAGCATACACTACAATCCGAGGATTGGTTCATCTGAGTTCATCATACCTATCCACAAATTCTTAAAGAGCCTTGATTATTCTTACTCAGTTGGAATGAGATTCAGGATGCGTTTTGAATCTGAAGATGCTGCAGAGCGAAGATTCACAGGATTGATTATTGGAATTACTGATGTGGATCCTGTTAGATGGCCTGGATCAAAATGGAAATGCCTAGTGGTAAGGTGGGATGACATGGAAGCTTCAAGGCTCAACAGGGTTTCGCCATGGGAGATTGAGCCCTCAGGCTCGTCTTCCACCACCAATAGCTTGATGGCAACTAGTTTGAAGAGGACCAAGACTGGATTGCCTTCATCAAAGCTAGAGTTTCCGGTTCCCAATAGAATTGGGACATCAGACTTTGGGGAATCACTGCGGTTCCAGAAGGTCTTGCAAGGTCAAGAAATTTTAGGCATTGATACTACTTTCGATAGCATCAGTGCTCATAGTCACCACCAGTTATCTGAATTACGGAGGTGCTATCCCGGTTCAACCTATCCCGGGATCGCTTCAACAGGAAACAACATCAGAATCCCACAAATGAATTCTGATGTTTCCTGCAATGGCTTTGGTGAATCTTTCCGATTCCAAAAGGTCTTGCAAGGTCAAGAAATACTTCCTAGCCAACCATATGGACAAGCCTTTTCTGTCGATGAGGCTTGTAGAAATGGTCGCTTTGGACTTTTTGATGGTCACCACCAGGTGCCAAGATCCACAAATGGATGGTCTTCCCAGACGAATAACAGCTCACATTTTCATCCATCAGTGTTGATGTACCAGCAAGCGTCAAACATGGATTATAATAACAAAATTAATCCGGTGATGGGGGATAACGTCCTTCAAAGAGGTTCATATTATGCTTCTGAAATGAAAGATGGTACATTTACGTCAACACCAACTAATAAGCCTATTTTCCACGGGCTAGCTCATGAAGACACAAATTCGTTTGGTACACATTCACGCGATTTGGTTACACTACAGAGAAGCGGTCAAGAGTTGGTTTCTACATGTAAAAGTAGCTGCAGAGTGTTTGGTTTTTCATTAAACGAGGGTGCTCCCATTGCAAATAAAGATGCTGAACCCTCTGCAGTCACTTGCCAGATAAATCCTGGACCTTCCTCCTTCACAAGACATGTTGAAGATGATTTCAATCCAAGGCATTCACTTCGGAGCAAGGCGGTTGAAAGTTACTGTACCAAAGGTGTGCTGCAGTATTGA 2109 0.4353 MMGLIDLNTTEEDETPSSGSSSSTSIGSVGAAGSGSSVCLELWHACAGPMISLPKKGSVVVYFPQGHLEHFHDFPLSFSDNIPSHVFCRVVDVKLHAEEGNDEVYCQVLLVPESEQVQQKLREGVIDGDGDGEGEDTDAVMKSTTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGQEWKFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGEDGELRLGIRRAVQLKSCSNFSSILGQQLNLGSLRDIVNALSTRCAFSIHYNPRIGSSEFIIPIHKFLKSLDYSYSVGMRFRMRFESEDAAERRFTGLIIGITDVDPVRWPGSKWKCLVVRWDDMEASRLNRVSPWEIEPSGSSSTTNSLMATSLKRTKTGLPSSKLEFPVPNRIGTSDFGESLRFQKVLQGQEILGIDTTFDSISAHSHHQLSELRRCYPGSTYPGIASTGNNIRIPQMNSDVSCNGFGESFRFQKVLQGQEILPSQPYGQAFSVDEACRNGRFGLFDGHHQVPRSTNGWSSQTNNSSHFHPSVLMYQQASNMDYNNKINPVMGDNVLQRGSYYASEMKDGTFTSTPTNKPIFHGLAHEDTNSFGTHSRDLVTLQRSGQELVSTCKSSCRVFGFSLNEGAPIANKDAEPSAVTCQINPGPSSFTRHVEDDFNPRHSLRSKAVESYCTKGVLQY 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g03223 702 CDD B3_DNA 147 249 IPR003340 GO:0003677
Mepo2g03223 702 SMART B3_2 149 251 IPR003340 GO:0003677
Mepo2g03223 702 FunFam Auxin response factor 312 383 - -
Mepo2g03223 702 Pfam Auxin response factor 276 356 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Mepo2g03223 702 Pfam B3 DNA binding domain 149 250 IPR003340 GO:0003677
Mepo2g03223 702 MobiDBLite consensus disorder prediction 10 28 - -
Mepo2g03223 702 ProSiteProfiles B3 DNA-binding domain profile. 149 251 IPR003340 GO:0003677
Mepo2g03223 702 Gene3D - 147 251 IPR015300 -
Mepo2g03223 702 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 37 650 IPR044835 GO:0003677|GO:0006355|GO:0009725
Mepo2g03223 702 FunFam Auxin response factor 147 251 - -
Mepo2g03223 702 SUPERFAMILY DNA-binding pseudobarrel domain 141 258 IPR015300 -
Mepo2g03223 702 Gene3D - 312 386 - -
Mepo2g03223 702 MobiDBLite consensus disorder prediction 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g03223 Mepo-Chr2 41825861 41831007 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g03223 33 677 B3 DNA Binding Superfamily AT5G60450 40.870 1.93e-146 443
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Mepo2g03223 B3 6.8e-23 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g03223 K14486 - gmx:100808119 1035.02