Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g03207 ATGGCTCCCAAGAAGAAAGTACATTGGCCAAGCAGCTTTAAAACAATTAAAAAGTCTAAATCTAAAATCAACTATTTGATCTTTTTTAATGGTGGAGATAATGAAGAAAGAAATCCTGGACCAAGGCCAAGATGGATCCCAAAGCCTGAGCAAATCCGCATTCTTGAAGCTATCTATAACTCAGGGATGAAGAATCCACCTGTAGACGAGATAAAGAAGATACGTCAAAAATTACAAGAATTTGGACAAATTGGTGATGCCAGTGTCTTTTACTGGTTTCAAAACCGCAAGTCCAAAGGCAAAAACAAAAAAGTACCCTACCCCAAGAAATTAAAAAGACAACCAAATGCAGATCCAGCTCCTAATAACTCTCTCCCACAAATCACCACACCACCACCCAACTCATCTTCATCATCCTCCTCTAACAATATTGGAATCTCCAATATTAATGATGGGACAGTGATGGTGCCTAATTCACCCGCAATCTCTCTGAACCAAAACCAAGATGATACTTATCCTCACACCCTCACTGAAACCAATCTACAACTATCTACACCCCCATTTCCCTCTTTCCCTGTTGAGAATCATATTAATGAAGGGGTGGTGCTTAATGGCATGACAACAGTACTAAAGGGGTCTAATTACTTCTCTGATTTCTCAAATATGATTGAACCCTCACCTCAACAAAATGTTGATCTGCCTCTGCTTAATTATGATAACATCATGAACAATGAAAATGAAAATGGAATCTGCTCAATCACTGATCTTTTTTATCAAGAGAATGTTCAAGAGGAATCGATTAATATGATGCACATGCAGCACCAAGACCCACAATTTAATTTTGGTGTCACAATAGCTTCAAGTAATGATGATCATTCAACTGATCTTGCTCCTCTACCTCCAACCATTGACATGAGTGCACCTGTTGATATTCCATTCCTTTTTACCGATGATCAACTTCAAGGTTTTGGTGAGGATGATGGTACAGCAAAATGTAGGGTGATTACTATCAACGGTACATTCAAAGTTGATGCGGGGCCTTTTAACGTTCGTAAATTCTTTGGCGATGGAGCAGTTCTACTTGACTCCTCTGGTGTCCCGGTTCTAACCGATGAGTGGGGTGTCACCCTCAACTCACTCCACCATGGGGCAGATTATTTCCTGGTCAGCAATTTTTCCTTATAG 1185 0.3992 MAPKKKVHWPSSFKTIKKSKSKINYLIFFNGGDNEERNPGPRPRWIPKPEQIRILEAIYNSGMKNPPVDEIKKIRQKLQEFGQIGDASVFYWFQNRKSKGKNKKVPYPKKLKRQPNADPAPNNSLPQITTPPPNSSSSSSSNNIGISNINDGTVMVPNSPAISLNQNQDDTYPHTLTETNLQLSTPPFPSFPVENHINEGVVLNGMTTVLKGSNYFSDFSNMIEPSPQQNVDLPLLNYDNIMNNENENGICSITDLFYQENVQEESINMMHMQHQDPQFNFGVTIASSNDDHSTDLAPLPPTIDMSAPVDIPFLFTDDQLQGFGEDDGTAKCRVITINGTFKVDAGPFNVRKFFGDGAVLLDSSGVPVLTDEWGVTLNSLHHGADYFLVSNFSL 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g03207 394 Gene3D - 41 105 - -
Mepo2g03207 394 MobiDBLite consensus disorder prediction 117 152 - -
Mepo2g03207 394 Pfam Homeodomain 42 101 IPR001356 GO:0003677
Mepo2g03207 394 CDD homeodomain 41 104 IPR001356 GO:0003677
Mepo2g03207 394 ProSiteProfiles 'Homeobox' domain profile. 38 103 IPR001356 GO:0003677
Mepo2g03207 394 MobiDBLite consensus disorder prediction 100 152 - -
Mepo2g03207 394 SUPERFAMILY Homeodomain-like 37 102 IPR009057 -
Mepo2g03207 394 SMART HOX_1 40 107 IPR001356 GO:0003677
Mepo2g03207 394 PANTHER WUSCHEL-RELATED HOMEOBOX 9 1 390 IPR044557 GO:0003700|GO:0050793
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g03207 Mepo-Chr2 41702447 41711769 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g03207 8 103 Wox Gene Family AT2G33880 55.556 1.08e-32 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Mepo2g03207 Homeodomain 4e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g03207 - - mtr:25493054 561.222