Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g03203 ATGGAATCAGATCTGAGTTTTGCAGGAAAATCTCCTAGCCTTTCTATGGATCTTCCAAAAAGTCCTTCCATAAAATCAGCGATATCCAAAATGGTTCCTACTCAATCAGGTCCAACTTTTTCACCTCCACCATCACATTGCACTACATATCTGTACCAAAATCGTTGCAATCAATTTAAGGAACATCCTCTGAACAAGGCTTATCACAACTCTAGTTTTTCTAGAGTGGCTCCTTCCTCCATCAGCTCATTTCCTATGATCCCAACCCCTTCCTACAAGGATGTGTACACCAATGGATCCCAAAGTGAATTTATCAGTGCTCGAAATCCAATGATATTTGCGCCAAACTATAACAAAATGGAAGTCATGCGTGGTCCAGTTAACTCTAGCAAAGGAACTCGTGAATTGTGTACAAATAATCTCTTTCAATATGGTGAAACTTCACAATATCGGGTGAGTCCCTCACTATCACCATCACTAGTTTCTGATGGACATCCATCTATGTCAATTAAGTTTGAGCTTCAAGGCGGTCTTTCATGCAATGGTGGAATTGGAAACAATTCCAGAGAAAATAATCAAGGGTCTGTTCATAGTGACCAAAATCGCCAAAATATTATTCAAAATAATAGTGAAATTCGACTCAAGGATCCCAATATAATCAAGGGTCAATGGACTGCAAATGAGGATAGGGTTCTTGTTCAATTGGTGAATCACTTTGGTCTAAGAAAATGGTCCGAGATTGCGAAGTACATGAAAGGTAGGATTGGGAAACAGTGTAGAGAGAGATGGAATAACCATCTTCGTCCGGACATAAAGAAGGATTCATGGACCGAAGAGGAGGACAAAATACTAATTGAAGCTCACAAGATAGTTGGGAACAAGTGGGCTGAAATTGCAAAGAGAATGCAAGGGCGCACCGAGAACTCAATCAAGAACCACTGGAACGCCACTAAGCGCCGCCATAATGCTAAGAGAAAGAATCGGGGTAATAGTTCAAAGGGAAAACTACTCTTGAAATACATAATGGAAGTCAATAATGCTAAGGAAGTCGAAAAGGAGCTGATGACGAATTCTATGAGCATGAGGAAATTTGGGAATCACCCAAACTTTGAAAGCTCAGAGAGTGATTTTAGCTCTGAAGGTTTGGTTAATCCAAATGAGGAAATTGATGGGTATGCTCCAATGATGTCCAATGGTGATGATGGAATGGCTAGTGGATCAGGCACCACAGTGAATTATGATTTTGGAACGTATGGAATGGAGTTTTTTCCCGAAGTTCCTATGAAGCAGGAAATTGATTTCATGGGTATGATCTATAGGAACCCTTAA 1329 0.4026 MESDLSFAGKSPSLSMDLPKSPSIKSAISKMVPTQSGPTFSPPPSHCTTYLYQNRCNQFKEHPLNKAYHNSSFSRVAPSSISSFPMIPTPSYKDVYTNGSQSEFISARNPMIFAPNYNKMEVMRGPVNSSKGTRELCTNNLFQYGETSQYRVSPSLSPSLVSDGHPSMSIKFELQGGLSCNGGIGNNSRENNQGSVHSDQNRQNIIQNNSEIRLKDPNIIKGQWTANEDRVLVQLVNHFGLRKWSEIAKYMKGRIGKQCRERWNNHLRPDIKKDSWTEEEDKILIEAHKIVGNKWAEIAKRMQGRTENSIKNHWNATKRRHNAKRKNRGNSSKGKLLLKYIMEVNNAKEVEKELMTNSMSMRKFGNHPNFESSESDFSSEGLVNPNEEIDGYAPMMSNGDDGMASGSGTTVNYDFGTYGMEFFPEVPMKQEIDFMGMIYRNP 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g03203 442 MobiDBLite consensus disorder prediction 1 20 - -
Mepo2g03203 442 FunFam Transcriptional activator Myb isoform A 220 273 - -
Mepo2g03203 442 Pfam Myb-like DNA-binding domain 221 267 IPR001005 -
Mepo2g03203 442 Pfam Myb-like DNA-binding domain 273 315 IPR001005 -
Mepo2g03203 442 CDD SANT 275 318 IPR001005 -
Mepo2g03203 442 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 272 322 IPR017930 -
Mepo2g03203 442 ProSiteProfiles Myb-like domain profile. 216 267 IPR001005 -
Mepo2g03203 442 Gene3D - 274 339 - -
Mepo2g03203 442 CDD SANT 224 267 IPR001005 -
Mepo2g03203 442 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 216 271 IPR017930 -
Mepo2g03203 442 ProSiteProfiles SANT domain profile. 271 322 IPR017884 -
Mepo2g03203 442 SMART sant 272 320 IPR001005 -
Mepo2g03203 442 SMART sant 220 269 IPR001005 -
Mepo2g03203 442 ProSiteProfiles Myb-like domain profile. 268 318 IPR001005 -
Mepo2g03203 442 SUPERFAMILY Homeodomain-like 218 314 IPR009057 -
Mepo2g03203 442 Gene3D - 220 272 - -
Mepo2g03203 442 PANTHER MYB PROTEIN-RELATED 201 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g03203 Mepo-Chr2 41673713 41677823 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g03203 215 345 MYB Transcription Factor Family AT4G18770 67.939 4.69e-59 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mepo2g03203 Myb_DNA-binding 8.7e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g03203 K09422 - psat:127129356 488.419