Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g03197 ATGCATTTCCAATCCACTAGTCCTCAATCACTAGCAATAACTTGCCTCTCCTATTTATTCATCTCATTGGTTTTCATCAATGGCTACCAAGCTGAGGTTAGGAGTGGAAACAAGAAAGTTATATCTATAGGTGTAATAATTGATGTTAACTCTAGAGTTGGGAAAGAACAAAGAGTAGCCATGAATATTGCAGCTCAAAATTACAATAACACTTCAAGTACCAACAAGCTGGCTCTCTATTTTCAAGAACCCAACAAGGGTTCCTTCAGAGCCACGTCTCTTGCTGAAGAAATGATTAAAAACCAGAAGGTGGATGTGATTGTAGGGATGCAAACATGGACAGAAGCAGCTTCAGTGGCTGAATTAGTGCATGAAGATCAAGTTGAAGTTCCTATCATATCCTTTGTAGCACCGACAATTACTCCATCATTGATGCCGATTCGTTGGCCTTCTTTGGTAAGACTAGCTAACAATGGAACAGCATATGCGAAATGCATTGCTGATTTGGTTCATGTTTATAATTGGCATAGTGTAGTAGCCATCTATGAAGATGATGCATATGGTGGCGAGTCTGGGATGCTAGCACTTCTATCCGAGGCCCTCCAAGAGATTGGTTCAACGATTGAATATCGTTTAGCTTTGCCGTCACTTACTTATATGTCTAATCCAGGAGAGTTTATTCGACAAGAGCTGTTTAAGATAACCAAAAACACACAATCTCGGGTATTCGTTGTATTGAAATCATCATTAGAAATGGGAATTCATTTGTTTAAGGAAGCTTCACAAATGGGACTGGTGGATAGAGATTCAGCTTGGATAGTCTCAGAGAGCATAACTAATCTGTTGGATTCTGTCAATAAGTCAAGTATTTCCCATATGGAAGGAGCTTTAGGAATCAAAACATACTACTCAGAAAACAGCAATGAATATAAAGATTTTGAGGTTCAGTTTAGGAAAGCTTTTCGAGACAATAATCCTGACGAAGATAACCGGGATCCAGGATTTTATGCTTTGCAAGCATATGACAGCATTCAAATGGTTGGACATGCAATAAAAAGAATGGCTAGTGACAAGAAGACTTTACTACAAGAAATAGTGTCCAGCAATTTCCTTGGTTTAAGTGGAGAAATTCAATTTGAATCAGAACAGCTTTTGCAGAATCCTACATTGAGGATTGTAAATGTAGATGGGAAGAGTTACAGAGAATTAGACTTCTGGACTCTTGAAAATGGATTCTTCACTAACATCACGGAACAAGTTAAAAATGGTGCTTCAAGGAACTCAGAAAGTTTAAGTGGTGCAGTAATTTGGCCTGGAAAGTTGCTTAGAGCTCCAAAGGGATGGAACCTACCTACTAAACAAAAACCAATGAGAATTGCAGTCCCTGGAAGAACTTCATTTTCCAAATTTGTCAAGGTTGATTATGATGAGCAAGGAAATCCAAAATATAGCGGATTTTGCATTGATATTTTTGACAAGGTTTTAAAAATTTTGGGCTATGATCTTCCATATGACTATTATCCCATCAACGCAACCTATAATGATCTGGTTCAACTTGTTTATAACAAGACTTATGACGGTGTTGTTGGCGACATGACCATACTGGCAGAGAGATTGCAATATGTAGATTTTACTGTGCCATATGCAGAGTCAGGATTGTCCATGATAGTTACGGAAAAGTCCGATGAATCAGCATGGATGTTTATGAAGCCCTTCACCTGGCAAATGTGGGTGGTAACTGGTGTCATCTTGATTTATACAATGGTAGTAGTGTGGTACCTGGAGAGGGAAGACAATCCAGAGTTTCAAGGCAATTGGAAAAACCAAATCATCACTTCTTTTGGGTTTACTTTCTCCTCACTATTCTTTGCTCATAGAGAGAAAATGCATAGCAATTTATCTCGTATAGTAATGGTATCATGGCTGTTTCTAGTTTTGATTCTTAATTCAAGCTACACTGCAAGTCTTTCTTCAATGCTCACAGTTCAACAACTGCGAGCAAATATCACAAACATTGAGTGGCTGAAGAAGAACGACATGAAAATTGGTTGTGATGGAGATTCATTTGTTAGGACATACCTAGTGGAAGTCGAAAAATTCAAACCAGAGAACATCGTAAACATTAGTAATGAAAATAATTATGACCCTGGATTCAAAAACTACTCAATTGCTGCTGCTTTTCTTGAACTCCCTTATGAGAAAGTATACATCAGTAAATACTGCAAGGGGTACTCTGCTTCTACACCTACCACTAGATTTGGAGGACTTGGATTTATGTTCCAGAAAGGCTCTCCTTTGGCCAGAGATGTTTCTAAAGCTATTTTGCAGCTCTTACAGCAGGGTGAGTTGAAGAAACTAGAAGATATTTGGTTGAATCCCACAGATGTGTGCTCCAACAATTTGAATTCCAAGAGTACAGAAAGTTTGAAGCTGGGAAGTTTTTGGATTCTCTATGTGATTTCTGGTGCCACTTCTACTATTTGTTTTCTACTTTCTACCATCCACTCACTAAAAATAAAGGCACAAGAAAGTAATGGATCCCCAGATGATGTGAGTACGTGGAAAAGGGTGGTTACATTAACAAGGAAGATTTGCAGCAGAAAGCATAATAAAACCAGCCAGGTACAGGAAGATGTTATTGATTGTCCTTCCGGATGCGATTGCATCAGTACCCCTGAGCATCAGCAGGAAATGGCTCTTCAATTACCAGAAATCATAACAATATCTTCACCACCAACGCATGATCACGTGTAA 2754 0.3863 MHFQSTSPQSLAITCLSYLFISLVFINGYQAEVRSGNKKVISIGVIIDVNSRVGKEQRVAMNIAAQNYNNTSSTNKLALYFQEPNKGSFRATSLAEEMIKNQKVDVIVGMQTWTEAASVAELVHEDQVEVPIISFVAPTITPSLMPIRWPSLVRLANNGTAYAKCIADLVHVYNWHSVVAIYEDDAYGGESGMLALLSEALQEIGSTIEYRLALPSLTYMSNPGEFIRQELFKITKNTQSRVFVVLKSSLEMGIHLFKEASQMGLVDRDSAWIVSESITNLLDSVNKSSISHMEGALGIKTYYSENSNEYKDFEVQFRKAFRDNNPDEDNRDPGFYALQAYDSIQMVGHAIKRMASDKKTLLQEIVSSNFLGLSGEIQFESEQLLQNPTLRIVNVDGKSYRELDFWTLENGFFTNITEQVKNGASRNSESLSGAVIWPGKLLRAPKGWNLPTKQKPMRIAVPGRTSFSKFVKVDYDEQGNPKYSGFCIDIFDKVLKILGYDLPYDYYPINATYNDLVQLVYNKTYDGVVGDMTILAERLQYVDFTVPYAESGLSMIVTEKSDESAWMFMKPFTWQMWVVTGVILIYTMVVVWYLEREDNPEFQGNWKNQIITSFGFTFSSLFFAHREKMHSNLSRIVMVSWLFLVLILNSSYTASLSSMLTVQQLRANITNIEWLKKNDMKIGCDGDSFVRTYLVEVEKFKPENIVNISNENNYDPGFKNYSIAAAFLELPYEKVYISKYCKGYSASTPTTRFGGLGFMFQKGSPLARDVSKAILQLLQQGELKKLEDIWLNPTDVCSNNLNSKSTESLKLGSFWILYVISGATSTICFLLSTIHSLKIKAQESNGSPDDVSTWKRVVTLTRKICSRKHNKTSQVQEDVIDCPSGCDCISTPEHQQEMALQLPEIITISSPPTHDHV 917
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g03197 917 FunFam Glutamate receptor 565 695 - -
Mepo2g03197 917 Gene3D - 464 564 - -
Mepo2g03197 917 FunFam Glutamate receptor 456 566 - -
Mepo2g03197 917 FunFam Glutamate receptor 162 331 - -
Mepo2g03197 917 CDD PBP1_GABAb_receptor_plant 42 416 IPR044440 -
Mepo2g03197 917 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 42 839 IPR015683 -
Mepo2g03197 917 SMART GluR_14 458 793 IPR001320 GO:0015276|GO:0016020
Mepo2g03197 917 SUPERFAMILY Periplasmic binding protein-like I 36 448 IPR028082 -
Mepo2g03197 917 Gene3D - 334 460 - -
Mepo2g03197 917 Gene3D - 164 331 - -
Mepo2g03197 917 CDD GluR_Plant 455 791 - -
Mepo2g03197 917 SUPERFAMILY Periplasmic binding protein-like II 433 792 - -
Mepo2g03197 917 Pfam Bacterial extracellular solute-binding proteins, family 3 478 792 IPR001638 -
Mepo2g03197 917 Gene3D - 35 163 - -
Mepo2g03197 917 Gene3D - 565 694 - -
Mepo2g03197 917 PIRSF IGluLR_plant 10 905 IPR017103 -
Mepo2g03197 917 Gene3D - 695 794 - -
Mepo2g03197 917 Pfam Ligand-gated ion channel 793 822 IPR001320 GO:0015276|GO:0016020
Mepo2g03197 917 Pfam Receptor family ligand binding region 59 397 IPR001828 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g03197 Mepo-Chr2 41623566 41626925 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g03197 17 831 Ion Channels AT2G29120 33.176 5.52e-141 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g03197 - - gmx:100780320 1261.13