Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g03184 ATGGATTACTCTTTTTATGACAAAATTTATTCATCAGGGTATGATCATTTCGGTTTGTTCAATCAAACTTTGCATAACTTTGGAGCTTCCAATGGATTGTCATCACCACATTCATTGGTTTTGGAGAGTGAGAAGGAAAAGGTGGTGGAGTGCCCTGTTACTGAAAAGGTTGGCAAAGATGAGGTTTCTGATGTGAAAGGTTTAGCCTCTTTGAAGAACCATAGGGAAGCAGAGAGGAGAAGAAGGGAGAGAATAAATGGTCACCTTGGAACATTACGTGGTCTTGTGGCTTCCACTCATCAAAAGATGGATAAAGCCACAATACTTGCTGAAGTGATTAACCAAGTAAAGGAGTTGAAGAAGAATGCAATGGAAGCAAGCAAAGGTTTTCTCATTCCAACAGAAGTTGATGAAGTGAAAGTTGAACCATATGATATTAAATTAGGATATGGTTGCATGTCTTACATAGCAACTATCTGCTGTGATTACCAACCTGAGATACTATGTGACCTCAAAAAAACAATTGATGCACTTCAACTTCAACTAGTGAAGGCAGAGATGTCAACATTGGAAAGCAGGATGAAGAATATGTTTGTGTTTACATGTTGCAAAGGGAATAGTTTTAATGTTGAGGCATGTCAAAGTATTGCAAATGTTGTTCACAAGGCACTGGATTCTGTGCTGGAAAAGGCTTCTAACTCAATGGAATTCTCATTCAGAACTTCATATCCAAACAAGAGGAGAAGAATGTGCTTTGTTGAAACATCTACCTCTTCATGCAGCCATGGATCTTGTTCATGCTAA 804 0.3843 MDYSFYDKIYSSGYDHFGLFNQTLHNFGASNGLSSPHSLVLESEKEKVVECPVTEKVGKDEVSDVKGLASLKNHREAERRRRERINGHLGTLRGLVASTHQKMDKATILAEVINQVKELKKNAMEASKGFLIPTEVDEVKVEPYDIKLGYGCMSYIATICCDYQPEILCDLKKTIDALQLQLVKAEMSTLESRMKNMFVFTCCKGNSFNVEACQSIANVVHKALDSVLEKASNSMEFSFRTSYPNKRRRMCFVETSTSSCSHGSCSC 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g03184 267 Pfam Helix-loop-helix DNA-binding domain 73 119 IPR011598 GO:0046983
Mepo2g03184 267 Coils Coil 109 129 - -
Mepo2g03184 267 SMART finulus 75 125 IPR011598 GO:0046983
Mepo2g03184 267 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 72 121 IPR036638 GO:0046983
Mepo2g03184 267 Gene3D - 66 128 IPR036638 GO:0046983
Mepo2g03184 267 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 69 119 IPR011598 GO:0046983
Mepo2g03184 267 PANTHER TRANSCRIPTION FACTOR BHLH30 35 252 IPR045847 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g03184 Mepo-Chr2 41470132 41473348 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g03184 72 200 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G40200 41.667 1.90e-28 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mepo2g03184 HLH 8.8e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g03184 - - psat:127107084 340.117