Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g03162 ATGTCCGTTTTGGTTGTAACCGCCATGGATTTCGCCGTCCTCGGTTTTCTTATTCCTTCTCTTTGGGAGATCGAAGTCGCTTTCGCTGCCTCGGTTTTCGTTATTCTCGCGTATTGGTTCTTCACGTTTAGAATCGCTGACCGTGACTCCGATCGATCGCTTTCGGATAATTCCGCCGACGATAATGTCAAGATTGGCCAGTCAAGAGGAGATTCTCAAGCCGGTTCGGCGTACCTGATTAAGTTAGAACTATTGGCTGCTAAAAATCTGATCGCTGCAAATTTAAATGGCACATCGGATCCTTACACCATCATCACATGTGGCAATGAAAAGCGATTCAGTTCCATGGTCCCTGGTTCAAGAAATCCAATGTGGGGCGAAGAGTTCAATTTTTCTGTCGATGAACTTCCTGTCCAGATCAATGTCACAATTTATGATTGGGATATAATTTGGAAAAGTGCTGTTCTTGGTTCAGTGACTGTTCCAGTTGAAAGTGAAGGTCAAACTGGTGCAGTGTGGCATACTTTGGACAGCCCATCAGGGCAGGTTTGTCTTCATATAAAAACAGAAAAAATGTCTGCAAATTCTGCCAGGATAAATGGTTATGGCGGAGCCAACACTCGAAGAAGGATACCCTTGGAAAAACAGGAACCCACAGTAGTCCATCAAAAGCCAGGGCCTCTTCAAACGATATTTGAGCTTCATCCAGATGAGGTTGTTGATCATAGTTACTCTTGTGCACTTGAAAGGTCATTCTTGTACCATGGTCGTATGTATGTCTCAACATGGCACATTTGTTTCCATTCCAATGTGTTCTCAAAGCAAATGAAGGTGGTTATTCCGTTTGAAGATATAGATGAGATTCGAAGGAGTCAACATGCATTTATTAATCCTGCTATAACAATTATTCTTCGTATGGGTGCCGGTGGACATGGTGTCCCTCCTTTGGGAAGTCCTGATGGTAGAGTCAGATATAAGTTTGCGTCATTTTGGAACAGGAATCATGCAGTTAGAAGTCTACAACGTGCTGTAAAGAACTTCCGTGAAATGTTGGAAACTGAGAAGAAGGAAAATGCAGAGTCAGAATTGCGTGCACATAGCAGTTCTGTCAGACGAAGTGACATAATGGATAAGGTTCCCGAAACCAGCATGCCAAAAGCTGGAAAACGTCAAACTTTCATCAAAGAAGAGGCTTTAGTTGGTATATACAATGATGTTTTCCCCTGCACAGCGGAGCAGTTTTTTAACTTATTGTTAAAGGACGATTCAAAATTTACTAGCAAGTATCGTTCGGCACGAAAGGATACTAATCTTGTGATGGGACAATGGCATACAGCAGAAGAATATGACGGTCAAGTCCGGGAGATAACCTTCAGATCCCTTTGTAACAGCCCTATGTGCCCGCCAGACACAGCCATTACTGAGTGGCAACATGTTGTTCTATCATCTGACAAGAAAAACCTGGTGTTTGAGACTGTGCAACAGGCACACGATGTTCCACTCGGGTCCTGTTTTGAGGTGCACTGTAAATGGAGTTTGGAGACAACTGGAGAAAGTTCATGTACTCTGGACATAAGAGTGGGTGCACATTTCAAGAAATGGTGTGTGATGCAATCCAAAATAAAGTCAGGGGCAATCAATGAGTACAAGAAAGAAGTTGATGTGATGTTAGATGTTGCTCGTTCATATATAAAGCCACATACTTCTGATGATGAGAATGATAAGGCATCTTCGCCCCCTGCGGCAACTTTGGAAAATTAA 1761 0.4293 MSVLVVTAMDFAVLGFLIPSLWEIEVAFAASVFVILAYWFFTFRIADRDSDRSLSDNSADDNVKIGQSRGDSQAGSAYLIKLELLAAKNLIAANLNGTSDPYTIITCGNEKRFSSMVPGSRNPMWGEEFNFSVDELPVQINVTIYDWDIIWKSAVLGSVTVPVESEGQTGAVWHTLDSPSGQVCLHIKTEKMSANSARINGYGGANTRRRIPLEKQEPTVVHQKPGPLQTIFELHPDEVVDHSYSCALERSFLYHGRMYVSTWHICFHSNVFSKQMKVVIPFEDIDEIRRSQHAFINPAITIILRMGAGGHGVPPLGSPDGRVRYKFASFWNRNHAVRSLQRAVKNFREMLETEKKENAESELRAHSSSVRRSDIMDKVPETSMPKAGKRQTFIKEEALVGIYNDVFPCTAEQFFNLLLKDDSKFTSKYRSARKDTNLVMGQWHTAEEYDGQVREITFRSLCNSPMCPPDTAITEWQHVVLSSDKKNLVFETVQQAHDVPLGSCFEVHCKWSLETTGESSCTLDIRVGAHFKKWCVMQSKIKSGAINEYKKEVDVMLDVARSYIKPHTSDDENDKASSPPAATLEN 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g03162 586 CDD C2 80 176 - -
Mepo2g03162 586 ProSiteProfiles C2 domain profile. 61 176 IPR000008 -
Mepo2g03162 586 MobiDBLite consensus disorder prediction 566 586 - -
Mepo2g03162 586 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 78 189 IPR035892 -
Mepo2g03162 586 Pfam C2 domain 81 175 IPR000008 -
Mepo2g03162 586 FunFam BAG-associated GRAM protein 1 isoform X2 227 346 - -
Mepo2g03162 586 Coils Coil 337 364 - -
Mepo2g03162 586 PANTHER BAG-ASSOCIATED GRAM PROTEIN 1 11 578 IPR044655 -
Mepo2g03162 586 Gene3D C2 domain 63 191 IPR035892 -
Mepo2g03162 586 Pfam VAD1 Analog of StAR-related lipid transfer domain 402 547 IPR031968 -
Mepo2g03162 586 Gene3D - 227 346 IPR011993 -
Mepo2g03162 586 SMART gram2001c 226 292 IPR004182 -
Mepo2g03162 586 SMART C2_3c 79 175 IPR000008 -
Mepo2g03162 586 PRINTS C2 domain signature 140 148 IPR000008 -
Mepo2g03162 586 PRINTS C2 domain signature 95 107 IPR000008 -
Mepo2g03162 586 PRINTS C2 domain signature 119 132 IPR000008 -
Mepo2g03162 586 Pfam GRAM domain 229 297 IPR004182 -
Mepo2g03162 586 ProSiteProfiles VASt domain profile. 398 568 IPR031968 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g03162 Mepo-Chr2 41242773 41253811 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g03162 79 164 C2H2 Transcription Factor Family AT4G21160 25.581 1.51e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g03162 - - tpra:123924252 1073.92