Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g03160 ATGATAGCCAGCTCCTTCTGCAATGCTGATTCTATGTTTTCTAGTGAAGAAGGGATAGATGTTAGAAAGATGATGGGACATAAAAGGAGCCCCTGCTCTGTTGATCAAAGCAATTATAATTCTATTGCATCTAAAAAGCAAAAGCCTGATTTGTCGATCAGCACTAAGGATAGGAAGGAAAAGATTGGCGAACGAATTGTTGCTCTTCAACAGCTTGTTTCACCATATGGAAAGACAGATACATCTTCTGTTCTAAAGGAGGCAATGGACTACATAGGGTTCCTTCATAAACAAGTTAAGCTGCTTAGCGCTCCTTACCTCGAAACTGCACCAGCCACCCAGTTACAGGATACTGAGTTATGCAGCCTGAGGAGTAGAGGGTTATGTATTGTTCCTGTCTCGTTTACTAATGGAGTTGCTGACGGAAATGGCGCAGATATTTGGGCACCAATCAAGACCACTTCACCTAATCATGAGAAAGATGTCTCGCAATTTCAGTGA 501 0.4212 MIASSFCNADSMFSSEEGIDVRKMMGHKRSPCSVDQSNYNSIASKKQKPDLSISTKDRKEKIGERIVALQQLVSPYGKTDTSSVLKEAMDYIGFLHKQVKLLSAPYLETAPATQLQDTELCSLRSRGLCIVPVSFTNGVADGNGADIWAPIKTTSPNHEKDVSQFQ 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g03160 166 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 42 137 - -
Mepo2g03160 166 FunFam Transcription factor bHLH113 family 45 120 - -
Mepo2g03160 166 Gene3D - 44 116 IPR036638 GO:0046983
Mepo2g03160 166 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 46 95 IPR011598 GO:0046983
Mepo2g03160 166 CDD bHLH_AtbHLH_like 52 103 IPR045239 -
Mepo2g03160 166 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 53 110 IPR036638 GO:0046983
Mepo2g03160 166 SMART finulus 52 101 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g03160 Mepo-Chr2 41232402 41237303 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g03160 24 163 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31730 55.714 1.56e-49 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g03160 - - gmx:100809747 278.87