Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g03146 ATGGGTTGTGTTGTTCCTGCAGAACTTAGTTTAGATTTAAGACCAAATTTCGTTCCCAAAACCATCGCTAATTTCCTCTATCACCTTTCCACAATCCAAACCACCTCCGATAAACTCTCCAAACTCCATGATTTCCTCTCTCGACTCGAAGATGAACTCAATAAGATCGATGCTTTCAAACGTGAACTACCTCTCTCCATGCTTCTCTTAAACGACGCAATTTTGGTTTTGAAGGAGGAATTGGAAAAATGTAGAAGTAAGAATTGTGTGCCAGTTTTGGAAGAGTTTATTCCTTTGAAGAAAGAGATTGATCAGAGTGAAGAAAATAATGATAATGATAGAGACAAGAACAACGACAATGAATGCAGTAAAGATAAGAAGAATTGGATGAGTTCTGTTCAGTTATGGAATAACAACACAACAACTTCTAATAATAATGTCTCTGATCATCATAAACATAACAATCATAATCTTAATAAATTAGAAACCAAGAAAAGGGAGGAAGAAGGACAATTTGTGACTGTAGCTGAAGACCCTTTTCAATCTTGTAGTAGTAATAGAAATGGAGGAAGTGCTTTTATGCCTTTTTCACCGTATTCTTCTGTTCCTGTGACAACAGTCACATTATCAGCACCTAAAGAAGAGAAGGAAGAACCTGTAAGGAATAGGCTCTCTTTTCTGACTCCTGAGGTGAAGAGTTTGAGGGAAGGATTCGGTTCGAGGGGATCGAGAAGCAGTTCTAACAGGGCAGTTTCATCGTCGTCTCCTCCTACCGTGCAGCCGAGTATGTGTCCTGCGCCACTTCAGCCGCAGCAGACTTCTAGGAAACAGAGGAGATGCTGGTCGCCGGAATTGCACCGAAGATTTGTTAATGCGTTGCAGAAGCTTGGAGGATCTCAAGCAACTCCAAAGCAAATTAGAGAACTCATGCAAGTTGATGGCCTGACTAATGATGAAGTGAAGAGCCATTTGCAAAAATACCGACTTCATACACGGAGAGTTCCAGCTGCAAGTGGTACTGATCAGTCTGTTGTAGTTCTTGGAGGTTTATGGATGCCTCAAGAACAATACAACGACTCTTCCAAAGGTAGCAGTACGGCGTCTGGTTCTCCACAGAGTCCACTTCATTTAGCTACAGGATCCCGGGGAGGGACATCGCCAACTGAAGGTGATAGCATGGACGATGACGATGATGAAAAATCTGAGAGTTATAGCTGGAAAAGTCATATTCACAGACATGGAAAAGTTGGTGTATAG 1257 0.4161 MGCVVPAELSLDLRPNFVPKTIANFLYHLSTIQTTSDKLSKLHDFLSRLEDELNKIDAFKRELPLSMLLLNDAILVLKEELEKCRSKNCVPVLEEFIPLKKEIDQSEENNDNDRDKNNDNECSKDKKNWMSSVQLWNNNTTTSNNNVSDHHKHNNHNLNKLETKKREEEGQFVTVAEDPFQSCSSNRNGGSAFMPFSPYSSVPVTTVTLSAPKEEKEEPVRNRLSFLTPEVKSLREGFGSRGSRSSSNRAVSSSSPPTVQPSMCPAPLQPQQTSRKQRRCWSPELHRRFVNALQKLGGSQATPKQIRELMQVDGLTNDEVKSHLQKYRLHTRRVPAASGTDQSVVVLGGLWMPQEQYNDSSKGSSTASGSPQSPLHLATGSRGGTSPTEGDSMDDDDDEKSESYSWKSHIHRHGKVGV 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g03146 418 MobiDBLite consensus disorder prediction 239 278 - -
Mepo2g03146 418 MobiDBLite consensus disorder prediction 234 280 - -
Mepo2g03146 418 SUPERFAMILY Homeodomain-like 273 333 IPR009057 -
Mepo2g03146 418 MobiDBLite consensus disorder prediction 104 124 - -
Mepo2g03146 418 NCBIfam myb-like DNA-binding domain, SHAQKYF class 276 330 IPR006447 GO:0003677
Mepo2g03146 418 Gene3D - 272 334 - -
Mepo2g03146 418 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 273 332 IPR017930 -
Mepo2g03146 418 FunFam Myb family transcription factor 275 332 - -
Mepo2g03146 418 MobiDBLite consensus disorder prediction 356 418 - -
Mepo2g03146 418 MobiDBLite consensus disorder prediction 137 162 - -
Mepo2g03146 418 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 14 408 IPR044787 GO:0003700|GO:0006355
Mepo2g03146 418 MobiDBLite consensus disorder prediction 356 388 - -
Mepo2g03146 418 Coils Coil 42 62 - -
Mepo2g03146 418 Pfam Myb-like DNA-binding domain 278 328 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g03146 Mepo-Chr2 41067948 41071035 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g03146 7 366 G2-like Transcription Factor Family AT2G03500 40.107 1.99e-62 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mepo2g03146 Myb_DNA-binding 2.9e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g03146 - - mtr:25493035 705.286