Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g03138 ATGGGGGGTTGCACCTCAAAGCCACAGAAACCAAACCCATACGCCCTTAGAGAAACGGAAACTGACCCAACACAAATCCCACAGACCCCACAAAGTCCCTACACCGGTAACCGGAAAGATGACGTCATCGCCGGAAAAAAGTCACCGTTTTTCCCGTTTTACAGTCCAAGTCCAGCTCGGTTTCTGAAGAAGTCTCCGTCTACTCCGTCAACTCCAGCGAGTGAAAGAAGCCGTAACTCGACGCCGAGGAGGTTTTTCCGGCGACCCTTTCCACCGCCGTCTCCGGCGAAGCATATAAGGGCTGTGTTGGCTAGGAGACAAGGGAAGAAGGAAGCCACGGCGATACCGGAAGACGGAGAGGAGGGTGCCGGGGATTTGGACAAGAGATTTGGGTTTTCAAAGGATTTTGCTAGTAAGTTGGAGGTTGGGGAAGAAGTGGGTAGGGGGCATTTTGGGTATACTTCTTCTGCTAAATTCAAAAAGGGTGAGTTTAAGGGTCAACAAGTGGCTGTGAAAGTGATTCCTAAAGCAAAGATGACAACAGCAATTGCAATTGAAGATGTGAGAAGAGAGGTCAAAATATTGCGAGCTTTGAATGGGCACAGCAATTTGGTAAAATTTTACGATGCATTTGAAGACCAAGAAAATGTCTACATTGTAATGGAGTTATGTGAAGGGGGAGAGCTATTAGACATGATACTATCAAGAGGAGGGAAATACTCAGAAGATGATGCCAAAGCTGTCATGGTACAGATACTAAATGTTGTTGCATTTTGTCATCTTCAGGGTGTGGTGCACAGAGATCTTAAGCCTGAGAATTTTTTGTACACTACAAAGGATGAAAATTCTGAGTTAAAAGCTATAGACTTTGGGTTATCAGATTTTGTCAGACCAGATGAAAGGCTTAATGACATTGTTGGAAGTGCATATTATGTGGCTCCAGAAGTTCTCCATAGATCTTACAGTACAGAAGCTGATGTGTGGAGTATAGGTGTGATAGCATATATTCTACTATGTGGTAGTCGCCCATTTTGGGCTCGAACGGAATCAGGTATTTTTAGGGCAGTTTTGAAAGCTGATCCAGGCTTTGATGAAGGTCCCTGGCCATCCTTATCTTCAGAAGCAAAAGATTTTGTCAAACGCCTACTAAATAAGGACCCTCGGAAGCGAATATCTGCTGCTCAGGCTCTGAGTCATCCTTGGATACGTAATTACAATGATGTAAAAGTTCCACTTGATATTTTAATATTCAAGCTCATGAAGACATATATGAGATCTTCATCCTTGCGTAAGGCTGCCTTAAGGGCTTTATCTAAGACTTTAACTGCTGATGAACTCTATTATCTGAGGGAGCAATTTGCGTTATTGGAACCAAGCAAAAATGGCAGCATATCCTTGGAGAACATTAACAAGGCCTTGAAGAAATATGCAACAGATGCCATGAAAGAGTCTCGTATCACTGATTTTCTTTCCTCGCTGAGTTCATTACAATATAGAAGGATGGATTTTGAAGAATTTTGCGCGGCTGCATTAAGTGTGCATCAACTCGAAGCTCTTGATCGTTGGGAACAACATGCTCGCTGTGCATATGAACTTTTTGAGAAAGATGGAAACAGGGCTATTGTCATTGAAGAACTAGCTTCAGAACTTGGACTTGGTCCATCGATCCCTGTTCATGTTGTTCTTCATGACTGGATACGCCACACAGATGGGAAGTTAAGCTTTCTCGGGTTTGTCAAATTATTGCATGGTGTATCTAGCCGAAGCCTTCCGAAGGTTCAGTTATGA 1788 0.434 MGGCTSKPQKPNPYALRETETDPTQIPQTPQSPYTGNRKDDVIAGKKSPFFPFYSPSPARFLKKSPSTPSTPASERSRNSTPRRFFRRPFPPPSPAKHIRAVLARRQGKKEATAIPEDGEEGAGDLDKRFGFSKDFASKLEVGEEVGRGHFGYTSSAKFKKGEFKGQQVAVKVIPKAKMTTAIAIEDVRREVKILRALNGHSNLVKFYDAFEDQENVYIVMELCEGGELLDMILSRGGKYSEDDAKAVMVQILNVVAFCHLQGVVHRDLKPENFLYTTKDENSELKAIDFGLSDFVRPDERLNDIVGSAYYVAPEVLHRSYSTEADVWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPGFDEGPWPSLSSEAKDFVKRLLNKDPRKRISAAQALSHPWIRNYNDVKVPLDILIFKLMKTYMRSSSLRKAALRALSKTLTADELYYLREQFALLEPSKNGSISLENINKALKKYATDAMKESRITDFLSSLSSLQYRRMDFEEFCAAALSVHQLEALDRWEQHARCAYELFEKDGNRAIVIEELASELGLGPSIPVHVVLHDWIRHTDGKLSFLGFVKLLHGVSSRSLPKVQL 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g03138 595 Gene3D - 420 511 - -
Mepo2g03138 595 ProSitePatterns Protein kinases ATP-binding region signature. 146 172 IPR017441 GO:0005524
Mepo2g03138 595 Gene3D Transferase(Phosphotransferase) domain 1 229 414 - -
Mepo2g03138 595 SMART serkin_6 140 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo2g03138 595 MobiDBLite consensus disorder prediction 61 79 - -
Mepo2g03138 595 ProSitePatterns Serine/Threonine protein kinases active-site signature. 264 276 IPR008271 GO:0004672|GO:0006468
Mepo2g03138 595 FunFam CDPK-related kinase 1 438 511 - -
Mepo2g03138 595 MobiDBLite consensus disorder prediction 1 124 - -
Mepo2g03138 595 FunFam Calcium-dependent protein kinase SK5 312 407 - -
Mepo2g03138 595 Gene3D Phosphorylase Kinase; domain 1 142 228 - -
Mepo2g03138 595 MobiDBLite consensus disorder prediction 105 124 - -
Mepo2g03138 595 ProSiteProfiles Protein kinase domain profile. 140 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo2g03138 595 SUPERFAMILY Protein kinase-like (PK-like) 138 438 IPR011009 -
Mepo2g03138 595 FunFam CDPK-related kinase 1 133 228 - -
Mepo2g03138 595 FunFam CDPK-related kinase 3 132 304 - -
Mepo2g03138 595 Gene3D - 427 581 - -
Mepo2g03138 595 PANTHER SERINE/THREONINE-PROTEIN KINASE 124 569 - -
Mepo2g03138 595 Pfam Protein kinase domain 141 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo2g03138 595 SUPERFAMILY EF-hand 433 583 IPR011992 -
Mepo2g03138 595 CDD STKc_CAMK 141 401 - -
Mepo2g03138 595 MobiDBLite consensus disorder prediction 18 36 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g03138 Mepo-Chr2 40971187 40977273 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g03138 1 590 EF-hand Containing Proteins AT3G50530 73.144 0.0 926
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Mepo2g03138 Pkinase 2.5e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g03138 - K00924 gmx:100798913 1028.85