Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g03110 ATGAACTACGCCTTCTCCACTACCACCCTCACCTCCGATCAAGAACTCTCAGTCATCGTCGCTGCCCTAACCAACGTAGTCTCTGGTACCACCTCCACCGTGGGAAGCAGCGGCTTAGAGCAAATACTTCAACCGGCGAACATGGAAATATGCCGTGAATGCAACATAGCAGGATGTTTAGGATGCGATTTCTTCCCTGAAGAGAAAAAACAAAACCAAAAACAAAAGAGAGCTAAGAATAATAAGTACAGAGGAGTGAGGCGGAGGCCATGGGGAAAATGGGCTGCTGAGATTCGTGATCCGAGACGTGCAGTCCGTGTTTGGCTTGGAACATTTACCACGGCGGAGGAAGCTGCTAGAGCTTACGACAATGCCGCTATCGAGTTCCGTGGGCCGAGAGCCAGGCTTAATTTTCCACTTGTCGATGAATCCCTTAAGCGTGTTGAGGAACCAGAAGTGGTTGTACATGTAAAGGATGAGAATATGAATGAAGAAATGCTAATTGAGACGAATAATATTAGGGAAGCTGATTTTCAACAACTTATGAGGTTTATGGAATTTGGTGGAACAGGAAACACTTTTAATTAG 588 0.4592 MNYAFSTTTLTSDQELSVIVAALTNVVSGTTSTVGSSGLEQILQPANMEICRECNIAGCLGCDFFPEEKKQNQKQKRAKNNKYRGVRRRPWGKWAAEIRDPRRAVRVWLGTFTTAEEAARAYDNAAIEFRGPRARLNFPLVDESLKRVEEPEVVVHVKDENMNEEMLIETNNIREADFQQLMRFMEFGGTGNTFN 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g03110 195 SUPERFAMILY DNA-binding domain 82 140 IPR016177 GO:0003677
Mepo2g03110 195 Gene3D AP2/ERF domain 81 141 IPR036955 GO:0003700|GO:0006355
Mepo2g03110 195 ProSiteProfiles AP2/ERF domain profile. 82 139 IPR001471 GO:0003700|GO:0006355
Mepo2g03110 195 Pfam AP2 domain 82 131 IPR001471 GO:0003700|GO:0006355
Mepo2g03110 195 FunFam Ethylene-responsive transcription factor 2 81 140 - -
Mepo2g03110 195 PRINTS Ethylene responsive element binding protein signature 105 121 IPR001471 GO:0003700|GO:0006355
Mepo2g03110 195 PRINTS Ethylene responsive element binding protein signature 83 94 IPR001471 GO:0003700|GO:0006355
Mepo2g03110 195 PANTHER DNA-BINDING DOMAIN 69 152 IPR044808 GO:0003700|GO:0009873
Mepo2g03110 195 SMART rav1_2 82 145 IPR001471 GO:0003700|GO:0006355
Mepo2g03110 195 CDD AP2 82 139 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g03110 Mepo-Chr2 40752008 40752821 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g03110 10 142 AP2-EREBP Transcription Factor Family AT4G34410 46.591 4.04e-36 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mepo2g03110 AP2 1.2e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g03110 - - psat:127106187 251.136