Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g03096 ATGGCTAACCCAAGCAGAAATTCTACACAAACAATGTCGTTGGACTCCATGGAACAGAAGGGGAAAAATATTACTGAATCTAATGCAAGCATAAGTCAATGTCCTTTAAGCCAGCAACACCGTAACTCCTTAGATGGTCCAGTAGCTATCCTTTGGGATATTGAAAATTGTCCTGTTCCAAGTGATGTACGCCCAGATGATGTGGCAGGTAACATAAGAATGGCTCTGCAGGTGCACCCAGTAATTCAAGGAGCTGTTACGACATTTTCTGCTTATGGAGATTTCAATTCTTTCCCGAGGCGACTTAGAGAGGGCTGTCAGAGAACCGGTGTTAAACTGATTGATGTTCCCAACGGGAGAAAAGATGCTGCTGACAAGGCGATCTTGGTTGACATGTTCTTATTTGCTCTTGACAATCCTCCACCGTCCTCTATCATGCTAATCTCTGGAGATGTTGATTTTGCTCCAGCACTCCACATTCTTGGTCAGCGTGGATACACTATAATCCTTGTCATCCCTGCTGGGGTTGGTGTTTCATCTGCCCTATGCAATGCTGGTAAATTTGTCTGGGACTGGCCAATTGTGGCTCGTGGAGAAGGTTTTGTTCCCCCCTCAAAGGCTTTGGTGGCACCCCGTGGAGGTTCAGTTGAGCTTGCTGGATATTTGATGGGATGCCATATCAATAATGACAACACTGATGGACAAAATGAAGAAGAAGCAATAGTTTATAGAGGGATGTCACAGAGCTATTACAACTCAAGGGAATTCTCAATGGTATCACAATCTCTGTCTGAATATAACTCACCATACATGCCTTGCTTGCCAACATCTATGAGATCTTATAGCCTTCCATCTGGAGTGAATGATGTTGCGGGAGGACCTATTCCTTATAGCGACAATACTGAATGCCAGATGTGGGTACAGCCTGGGGATTTAAATGGTCTCAAGGGTCAGCTGGTAAGGCTGCTCGAACTTTCTGGAGGATGTGTGCCCCTGGTCCGAATTCCAGCAGAGTACCAGAAAATTTATGGTAAGACACTTTTTATATCTGATTATGGGGCATTCAAGTTGGTCGATCTTTTCAAAAAAATGGATGATGCTATTTCTGTGGAAGGGAAAGGGGCTCGCAGATTTGTATATCTCAGAAACAGGAAGGGAGGTCCAAGTGCCCCTCAGGTGTCTCTTGCAAAGAAAGATAAGAAAGGAAAAAGGGAACTGGAAGAGAATGCAAATGTTGTCAATGGTAGCTGCTCTTCAGATGAGTTGTCAGATGAAGAACGAGTTGTAGAAGAACATGATGAAAGAAGTTTTAAAGGAAAGGGTAGTAAGGGGAGAGCAGTCAGATGTGAAATTGATGGCAGTGTTCTTGAGCAGTTTAAGTGTGAGCTGCAGGAGATTCTGGTCAGCTATTCCTGTCGGATACTTCTAAGTTGTTTTGAGGCTGTATACCAGCAACGATACAAGAAACAGTTGGAATATCAGAGATATGGTGTGGATAAGCTGGAGGATTTGTTGGAGAAAGTGAGTGATGTGGTAACATTGCACGAGGAACCAGTAAGCAAGAGGAAATTCCTGGCTGCTGTCGGTGCTTAG 1593 0.4413 MANPSRNSTQTMSLDSMEQKGKNITESNASISQCPLSQQHRNSLDGPVAILWDIENCPVPSDVRPDDVAGNIRMALQVHPVIQGAVTTFSAYGDFNSFPRRLREGCQRTGVKLIDVPNGRKDAADKAILVDMFLFALDNPPPSSIMLISGDVDFAPALHILGQRGYTIILVIPAGVGVSSALCNAGKFVWDWPIVARGEGFVPPSKALVAPRGGSVELAGYLMGCHINNDNTDGQNEEEAIVYRGMSQSYYNSREFSMVSQSLSEYNSPYMPCLPTSMRSYSLPSGVNDVAGGPIPYSDNTECQMWVQPGDLNGLKGQLVRLLELSGGCVPLVRIPAEYQKIYGKTLFISDYGAFKLVDLFKKMDDAISVEGKGARRFVYLRNRKGGPSAPQVSLAKKDKKGKRELEENANVVNGSCSSDELSDEERVVEEHDERSFKGKGSKGRAVRCEIDGSVLEQFKCELQEILVSYSCRILLSCFEAVYQQRYKKQLEYQRYGVDKLEDLLEKVSDVVTLHEEPVSKRKFLAAVGA 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g03096 530 MobiDBLite consensus disorder prediction 1 21 - -
Mepo2g03096 530 ProSiteProfiles OST-type HTH domain profile. 455 529 IPR025605 -
Mepo2g03096 530 CDD LOTUS 456 518 - -
Mepo2g03096 530 Gene3D - 310 380 IPR041966 -
Mepo2g03096 530 Gene3D - 452 522 IPR041966 -
Mepo2g03096 530 ProSiteProfiles OST-type HTH domain profile. 311 383 IPR025605 -
Mepo2g03096 530 Pfam NYN domain 47 187 IPR021139 GO:0004540
Mepo2g03096 530 Gene3D - 40 192 - -
Mepo2g03096 530 CDD PIN_limkain_b1_N_like 47 173 - -
Mepo2g03096 530 PANTHER LIMKAIN B LKAP 22 494 IPR024768 GO:0005777|GO:0010468
Mepo2g03096 530 Pfam OST-HTH/LOTUS domain 313 378 IPR025605 -
Mepo2g03096 530 Pfam OST-HTH/LOTUS domain 455 518 IPR025605 -
Mepo2g03096 530 CDD LOTUS 312 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g03096 Mepo-Chr2 40603368 40606822 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g03096 44 198 C2H2 Transcription Factor Family AT5G61190 42.581 1.77e-29 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g03096 - - gmx:100818186 853.588