Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g03095 ATGCACCTCCCTCTTCTAATGGCTGATTGCCCTTTGAATTTTGCTGCTTCAAACTTTACACTGGCATCCTCTTTATGCTCTGACCAAGGTGAGCGAGGAAAATGTTGCCGCTACATTAATGCTAATATTGCAATTTCTGTTGCTCATTTTGCTAATGCAACAAGCAACCTAGGGGTCCCTCTAAATATCTCTGATATCTGCCTCCAAACCATATCTCAGAACTTGCAACTTTATGGAGTTCCACGGCTTGCAACAGTCTTCTGTGGATTCGGGACAAAAATTCGCGTTAATTACGAATGCAAGGGTCGAACTAGTGTTATGCAGATGCTGCAATCTCCCAGATTTGTGGAGGTCACAAAACATTGCAGATTGCCTCTTGCAAAGGAAAGTAAATGTAAGAAGTGTGTAAACGCGAGCATTGGTTATCTGCGTCAATTAGGAATTGAAGATAATATTACACTGAGTACATGCCGTGATGCTACTTTTGCTGCACTAGCAAGCCAAGTAGATGAGATGTATACCACTGATATTGCAAGTTGTTTCTTTGGCGTTCAAGGACTTCTCGGGACTCCTGTTTCAGAATCATCCCCATCATTACCTGCTCCTGAGGTTTCGCCAAGTCCACCGGTTGCTGCTGATAGCCCAAGTCAACTATTGTTAGGTCTACCAACTAAGGGAAAACACCATTCATATCACTTGGCATTAGTTCCATGTATTGCTATTGCAGTTACAGCTGTTGCTTTTGTGATGTTCATAGTCTTGATAATTCTAATTCGCCAAAAAAGCAGAGAGCTAAATGAGCCTCATAATTTTGGTAAACCCAGTTCGAAAACTGTACCTTCTATGGCAAAATGGAAATTTCAGGAAGGCTCGTCATCTATGTTTCGAAAGTTCAACTTTAAAGAGATAAAGAAGGCAACAGAGGGGTTTAGCACCATCATTGGCCAAGGGGGATTTGGAACGGTATATAAAGCTCATTTTAGTGATGGCCAAGTTGCAGCAGTAAAGCGAATGGACAGAGTCTCAGAACAGGGAGAGGATGACTTCTGCAGAGAAATTGAGCTTCTTGCTCGGCTGCACCATCGGCATCTTGTTACGTTAAGAGGCTTTTGTATCAAAAAACAAGAGAGGTTTCTGCTGTACGAGTACATGGGAAATGGAAGCTTAAAAGATCATCTTCATTCCCCTGGTAAAACACCACTAAGTTGGCGAACTAGAATCCAAATTGCTATTGATGTGGCTAATGCACTGGAGTACCTTCATTTCTATTGTGATCCTCCACTGTTTCACAGAGATATCAAGGCTAGCAACACTTTACTGGATGAGAACTTTGTTGCTAAGATAGCTGATTTTGGCCTTGCACAAGCTTCAAAAGATGGTTCGATATGCTTTGAACCTGTAAACACTGAAATATGGGGAACTCCAGGTTATATGGATCCGGAATATATTGTTACTCAAGAGCTCACCGAGAAAAGTGATATATACAGTTATGGGGTGTTACTACTAGAAATTGTGACAGGAAGAAGAGCTATTCAAGACAATAAGAATTTGGTAGAATGGGCCAAACCATACATGGAATCAGAAACTAAATTATTAGAACTAGTAGATCCCAATGTGAGGGAATCTTTTGACTTGGATCAGCTTCAAACAGTAATTTCTATAGTAGGATGGTGCACACAGAGAGAAGGAAGAGCAAGACCTTCAATAAAACAAGTCCTTAGGCTTCTGTATGAGACATCGGAACCAATGCACACTGAGTTTCTACAAGCTGTTGAAGATGAGGAGAGTCAAGGAAATGAGCAGAGAGGCAGAAGAAGCAAAGGAAAAATGCTCAGAAATGAAGGAAATTTTCACAGCGGGGATGGAAGATATCTCGCTTCTTCTTCAAGTACGTCTCGGTCGTATTGTAGTAGAAGCTTTTTACTAGAAAATGGGTCCGCACAGTCATCACCAAATGTATTTTCAGTCTGA 1971 0.413 MHLPLLMADCPLNFAASNFTLASSLCSDQGERGKCCRYINANIAISVAHFANATSNLGVPLNISDICLQTISQNLQLYGVPRLATVFCGFGTKIRVNYECKGRTSVMQMLQSPRFVEVTKHCRLPLAKESKCKKCVNASIGYLRQLGIEDNITLSTCRDATFAALASQVDEMYTTDIASCFFGVQGLLGTPVSESSPSLPAPEVSPSPPVAADSPSQLLLGLPTKGKHHSYHLALVPCIAIAVTAVAFVMFIVLIILIRQKSRELNEPHNFGKPSSKTVPSMAKWKFQEGSSSMFRKFNFKEIKKATEGFSTIIGQGGFGTVYKAHFSDGQVAAVKRMDRVSEQGEDDFCREIELLARLHHRHLVTLRGFCIKKQERFLLYEYMGNGSLKDHLHSPGKTPLSWRTRIQIAIDVANALEYLHFYCDPPLFHRDIKASNTLLDENFVAKIADFGLAQASKDGSICFEPVNTEIWGTPGYMDPEYIVTQELTEKSDIYSYGVLLLEIVTGRRAIQDNKNLVEWAKPYMESETKLLELVDPNVRESFDLDQLQTVISIVGWCTQREGRARPSIKQVLRLLYETSEPMHTEFLQAVEDEESQGNEQRGRRSKGKMLRNEGNFHSGDGRYLASSSSTSRSYCSRSFLLENGSAQSSPNVFSV 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g03095 656 ProSitePatterns Serine/Threonine protein kinases active-site signature. 428 440 IPR008271 GO:0004672|GO:0006468
Mepo2g03095 656 CDD STKc_IRAK 314 576 - -
Mepo2g03095 656 FunFam Putative receptor-like protein kinase 276 383 - -
Mepo2g03095 656 MobiDBLite consensus disorder prediction 590 630 - -
Mepo2g03095 656 SMART serkin_6 308 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo2g03095 656 Gene3D Phosphorylase Kinase; domain 1 275 383 - -
Mepo2g03095 656 ProSitePatterns Protein kinases ATP-binding region signature. 314 336 IPR017441 GO:0005524
Mepo2g03095 656 ProSiteProfiles Protein kinase domain profile. 308 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo2g03095 656 FunFam Putative receptor-like protein kinase 384 584 - -
Mepo2g03095 656 Pfam SPARK 8 146 IPR043891 -
Mepo2g03095 656 Pfam Protein kinase domain 312 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo2g03095 656 MobiDBLite consensus disorder prediction 590 616 - -
Mepo2g03095 656 Gene3D Transferase(Phosphotransferase) domain 1 384 603 - -
Mepo2g03095 656 PANTHER OS01G0750732 PROTEIN 153 598 - -
Mepo2g03095 656 SUPERFAMILY Protein kinase-like (PK-like) 288 579 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g03095 Mepo-Chr2 40597774 40603190 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g03095 2 655 Receptor kinase-like Gene Family AT3G19300 59.119 0.0 749
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-1 Mepo2g03095 Pkinase 3.5e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g03095 - - gmx:100809641 1071.61