Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g03091 ATGCGTGGCTGTTTAGAACCATTAGATATAGGGGTTCAAATTCCTTACCACTTCAGATGTCCAATCTCCCTAGAACTCATGCGAGACCCGGTGACTGTCTCCACCGGTCAAACCTACGACCGAAATAGCATCGAGTCGTGGGTTAACACCGGTAACACGACGTGTCCGGTTACCCGTACCAATCTCACAGATTTCACCTTCATACCTAATCACACCCTCCGCCGTTTAATCCAAGATTGGTGCGTTTCCAACCGCGCGTTTGGAGTTCAGCGGATTCCAACACCCAAACAGCCTGCAGATGCTGCTCTTGTTCGTTCTTTACTTAACCAAATATCTTCCCATTCTGCCCCTACTCAACTACGTCTCAACTCGCTCCGGCGACTCAGATCGCTAACTCGTGACTCGGAATATAACCGTTCTCTTATATCCTCTCTCAACGTTCGGAATATTATATTACCTATTCTTTTTAACAACGGTTTAGACGAGTTAAAAAATGAGTCACTCGCTTTGATAGTTCTTTTTCCACTCAGTGAGTCAGAATGTACTTCACTCGCTTCCGATTCAGATAAGATTAACTATCTTACAAGTCTTCTTTCACATGATTCGTTCGATGTTCGAGTTAACTCAGCCGCGTTGATTGAAATCATCATCGCCGGAACTCACTCGCCGGAGATTCGTCTTCAGGTAAGTAATGTCGACGGGATCTACGACGGTGTTGTTGAGATATTGAAGAATCCGATATCGTATCCACGTGCACTGAAGATAGGAATTAAAGCTTTGTTCGCGTTATGTTTGGTGAAACAAACGCGCCACCGTGCAGTTTCCGCCGGTGCACCTGTCGTACTTATTGACCGGCTTGCTGATTTCGAAAAGTGTGACGCGGAGAGAGCGTTAGCAACAGTGGAGTTGTTATGCCGTGTTCCGGCTGGTTGCGCGGCATTCGCCGGTCATGCTCTCACGGTGCCGATGCTTGTGAAGATAATATTAAAGATATCGGATCGTGCGACGGAGTACGCCGCCGGAGCACTCATGGCGCTGTGTTCGGAATCGGAACGATGTCAACGAGAAGCGGTTGCGGCGGGGGTGCTGACTCAGCTTTTGCTTCTAGTGCAGAGTGATTGTACTGAGAGAGCGAAGAGGAAGGCGCAACTGTTGCTGAAGCTTCTTCGGGATTCGTGGCCTCAAGATTCCGTTGGAAATTCTGATGATTTTGCATGCAGACATTTTGACTGA 1233 0.4785 MRGCLEPLDIGVQIPYHFRCPISLELMRDPVTVSTGQTYDRNSIESWVNTGNTTCPVTRTNLTDFTFIPNHTLRRLIQDWCVSNRAFGVQRIPTPKQPADAALVRSLLNQISSHSAPTQLRLNSLRRLRSLTRDSEYNRSLISSLNVRNIILPILFNNGLDELKNESLALIVLFPLSESECTSLASDSDKINYLTSLLSHDSFDVRVNSAALIEIIIAGTHSPEIRLQVSNVDGIYDGVVEILKNPISYPRALKIGIKALFALCLVKQTRHRAVSAGAPVVLIDRLADFEKCDAERALATVELLCRVPAGCAAFAGHALTVPMLVKIILKISDRATEYAAGALMALCSESERCQREAVAAGVLTQLLLLVQSDCTERAKRKAQLLLKLLRDSWPQDSVGNSDDFACRHFD 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g03091 410 FunFam RING-type E3 ubiquitin transferase 8 90 - -
Mepo2g03091 410 PANTHER WDSAM1 PROTEIN 12 395 IPR045185 GO:0061630
Mepo2g03091 410 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 13 87 IPR013083 -
Mepo2g03091 410 Pfam U-box domain 14 85 IPR003613 GO:0004842|GO:0016567
Mepo2g03091 410 CDD RING-Ubox_PUB 15 67 IPR045210 -
Mepo2g03091 410 SUPERFAMILY RING/U-box 12 89 - -
Mepo2g03091 410 SMART Ubox_2 17 80 IPR003613 GO:0004842|GO:0016567
Mepo2g03091 410 ProSiteProfiles U-box domain profile. 13 87 IPR003613 GO:0004842|GO:0016567
Mepo2g03091 410 SUPERFAMILY ARM repeat 103 389 IPR016024 -
Mepo2g03091 410 Gene3D - 96 401 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g03091 Mepo-Chr2 40563924 40565699 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g03091 1 404 U-box Gene Family AT1G49780 65.133 0.0 523
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g03091 - - gmx:100810176 659.062