Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g03090 ATGGCCATGAATGTAGATCATGATCAAGGTGTTCAGACAGGTTTCATTTGGGAAAATCATCCATTGGGTGATCTTCCAAATTCTGATCATAACTTAGGTGAGAGTAGCAAACAAAGATTCCACACAAAACCATTGAACCAGAATGAAGGAATCAACGAAGGAGAAGCTTCTGTGAGCAAGAAGAGAAATCGGGGTGGGGTTGTAATTAGAACTGAGAATAATATTACAACTGATGAAGAAAAAGATAAAAAGTATCGTGATTTTGATCATGAAATGCACATACTGACTGAAAGAGAAAGGAGAAAGAAAATGAGGAACATGTTTGATAGCCTTCATGCCTTGCTTCCTGAACTTCCTTCTAAGGCTGATAAATCAACCATTGTGGATGCAGCAGTGAAGCACATTAAAAATCTGGAAGAAATTAAGGAAAAGCTTGAAAAGAAGAAGCAAGAAAGGTTCAAAGCTGTATCCCCATTTGGGAGTGAGTCATCTGTGATCAACTCACAGTGGCATCCCTATGAATCAAGGGAAGCATTCTTAGCTGATCAAGGATCTTCAAGTTATAATAATAACTTGTCTAGTGCAATTGTAACTTCAAATCCTTCAAATGCATTTTCAATACCTCCACCACAACAAGTAGGTTTTCAAACATGGTCTTCTCAAAATGTTGTGCTTAACATATGTGGTGGTGAAGCACAATTTTGCATTTGTGCAACTAAGAAGCCTGGTCTCTTGACCACAATTGCTTTGGTGTTGGAGAAACATAAGGTTGATGTTATTTCTGCCAACATTATGTGCAATGCAAATGGAAACTTCTACATGATTATGGCTCATGCAAAACAAGCTTCGCATGATGCAAAATCGATGGAGGAAACTTACAAGCAAGCAGCTTTAGAAATTATGACGAGGATCGCTTAA 918 0.3802 MAMNVDHDQGVQTGFIWENHPLGDLPNSDHNLGESSKQRFHTKPLNQNEGINEGEASVSKKRNRGGVVIRTENNITTDEEKDKKYRDFDHEMHILTERERRKKMRNMFDSLHALLPELPSKADKSTIVDAAVKHIKNLEEIKEKLEKKKQERFKAVSPFGSESSVINSQWHPYESREAFLADQGSSSYNNNLSSAIVTSNPSNAFSIPPPQQVGFQTWSSQNVVLNICGGEAQFCICATKKPGLLTTIALVLEKHKVDVISANIMCNANGNFYMIMAHAKQASHDAKSMEETYKQAALEIMTRIA 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g03090 305 CDD bHLH_AtbHLH_like 93 138 IPR045239 -
Mepo2g03090 305 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 88 138 IPR011598 GO:0046983
Mepo2g03090 305 SMART finulus 94 144 IPR011598 GO:0046983
Mepo2g03090 305 Pfam Helix-loop-helix DNA-binding domain 91 139 IPR011598 GO:0046983
Mepo2g03090 305 PANTHER BHLH DOMAIN-CONTAINING PROTEIN 42 302 IPR044278 GO:0003700|GO:0006355|GO:0009960
Mepo2g03090 305 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 91 159 IPR036638 GO:0046983
Mepo2g03090 305 Gene3D - 76 154 IPR036638 GO:0046983
Mepo2g03090 305 Coils Coil 128 155 - -
Mepo2g03090 305 Coils Coil 279 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g03090 Mepo-Chr2 40544448 40546720 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g03090 12 301 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G49770 34.688 1.91e-43 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mepo2g03090 HLH 5.6e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g03090 - - psat:127104597 362.459