Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g03089 ATGGCCATGAGTGTAGATCATGATCAAGGTATTCAGACAGGTTTCATTTGGGAGAATCATCCATGGGGTGATCTTCCAAATTCTGATAACTTAGGTGAGAGTAGCAAAAAAAGAATAAAACCATTGAACCAGAATGAAGGAATCAATGAAGGAGAAGCTCCTGTGAGCAAGAAGAGAAGTCGGGGTGGGGTTGTAATTAGAAGTGATGAAGAAAAAGATAGAAAGTATCGTGATTTTGATCATGAAATGCACATACTGACTGAAAGAGAAAGGAGAAAGAAAATGAGGAACATGTTTGATAGCCTTCATGCCTTGCTTCCTGAACTTCCTTCCAAGGCTGATAAATCAACCATTGTAGATGCAGCAATGAAGCACATTAAAAATCTGCAAGAAATTATGGAAAAGCTTGAAAAGAAGAAGCAAGAAAGGTTCAAAGCTGTATCCACATTTGGGAGTGAGTCATCTGTGATCAACTCACAGTGGCATCCCTATGAATCAAGGGAAGCATTCTTAGCTGATCAAGGATCTTCAAGTTATAATAATAACTTGTCTAGTGCAATTGTAACTTCAAATCCTTCAAATGCATTTTCAATACCTCCACCACAACAAGTAGGTTTTCAAACATGGTCTTCTCAAAATGTTGTGCTTAACATATGTGGTGGTGAAGCACAATTTTGCATTTGTGCAACTAAGAAGCCTGGTCTCTTGACCACAATTGCTTTGGTGTTGGAGAAACATAAGGTTGATGTTATTTCTGCCAACATTATGTGCAATGCAAATGGAAACTTCTACATGATTATGGCTCATGCAAAACAAGCTTCACATGACGCAAACTCAATGGAGGAAACTTACAAGCATGCGGCTGGAGAAATTATGACGTGGATCGCTTAG 891 0.3872 MAMSVDHDQGIQTGFIWENHPWGDLPNSDNLGESSKKRIKPLNQNEGINEGEAPVSKKRSRGGVVIRSDEEKDRKYRDFDHEMHILTERERRKKMRNMFDSLHALLPELPSKADKSTIVDAAMKHIKNLQEIMEKLEKKKQERFKAVSTFGSESSVINSQWHPYESREAFLADQGSSSYNNNLSSAIVTSNPSNAFSIPPPQQVGFQTWSSQNVVLNICGGEAQFCICATKKPGLLTTIALVLEKHKVDVISANIMCNANGNFYMIMAHAKQASHDANSMEETYKHAAGEIMTWIA 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g03089 296 Gene3D - 77 149 IPR036638 GO:0046983
Mepo2g03089 296 Pfam Helix-loop-helix DNA-binding domain 82 130 IPR011598 GO:0046983
Mepo2g03089 296 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 82 148 IPR036638 GO:0046983
Mepo2g03089 296 CDD bHLH_AtbHLH_like 84 137 IPR045239 -
Mepo2g03089 296 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 79 129 IPR011598 GO:0046983
Mepo2g03089 296 MobiDBLite consensus disorder prediction 22 64 - -
Mepo2g03089 296 SMART finulus 85 135 IPR011598 GO:0046983
Mepo2g03089 296 PANTHER BHLH DOMAIN-CONTAINING PROTEIN 29 295 IPR044278 GO:0003700|GO:0006355|GO:0009960
Mepo2g03089 296 Coils Coil 119 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g03089 Mepo-Chr2 40529685 40531370 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g03089 12 296 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G49770 33.956 2.18e-43 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mepo2g03089 HLH 7.9e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g03089 - - psat:127104597 377.096