Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g03070 ATGAGGAAGCCTAGCTGTGATATCAAATTAGACAAGAACAAAGGAACTTGGTCCAAACAAGAAGACCAAAAACTCATAGATTATATAAACAAACACGGTGAGGTTTGTTGGAGTACACTCCCTCAAGCTGCAGGTTTACTTCGGTGTGGTAAAAGTTGTAGGCTGAGATGGATGAACTATCTACGACCAGACCTTAAAAGAGGCAACTTTGCTGAAGATGAAGAAGATCTCATCATCAAGCTTCATGCACTTCTAGGCAATCGGTGGTCACTAATTGCTGGGAGATTGCCTGGACGTACAGATAATGAAGTTAAGAACTTTTGGAACTCTCATATAAGAAAAAAGTTGATTAGGAAGGGTATTGATCCAAATAATCACGGTTTAAACCACAAAATCCCTCCCCTTCAAAACCCAATCATGTCTAATAGTTCAAAATCTTTTGGCTTGAAAGACATTATTAGGAAGAATTGGACAAGTAAAACCCATGTTGACAATCATGGTGAAGTACTCTCGAATGCTGCAAAAGGCAAGGATGACTCATATGCCCTATTGTTGGATTTAAACCTTGATCTCTCACTATGA 582 0.39 MRKPSCDIKLDKNKGTWSKQEDQKLIDYINKHGEVCWSTLPQAAGLLRCGKSCRLRWMNYLRPDLKRGNFAEDEEDLIIKLHALLGNRWSLIAGRLPGRTDNEVKNFWNSHIRKKLIRKGIDPNNHGLNHKIPPLQNPIMSNSSKSFGLKDIIRKNWTSKTHVDNHGEVLSNAAKGKDDSYALLLDLNLDLSL 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g03070 193 CDD SANT 69 112 IPR001005 -
Mepo2g03070 193 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Mepo2g03070 193 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Mepo2g03070 193 SMART sant 13 63 IPR001005 -
Mepo2g03070 193 SMART sant 66 114 IPR001005 -
Mepo2g03070 193 FunFam MYB-related transcription factor 13 66 - -
Mepo2g03070 193 CDD SANT 16 61 IPR001005 -
Mepo2g03070 193 FunFam MYB transcription factor 68 128 - -
Mepo2g03070 193 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Mepo2g03070 193 Gene3D - 69 132 - -
Mepo2g03070 193 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Mepo2g03070 193 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Mepo2g03070 193 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Mepo2g03070 193 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Mepo2g03070 193 Gene3D - 9 66 - -
Mepo2g03070 193 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g03070 Mepo-Chr2 40363584 40366562 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g03070 2 184 MYB Transcription Factor Family AT4G38620 56.150 9.41e-70 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mepo2g03070 Myb_DNA-binding 1.3e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g03070 K09422 - gmx:100818783 286.574