Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g03042 ATGGAAACCAGTAGCGGCAATAACAGCAGCAACATGATGTGGTTTTTCAAGGATAGAGGCTTTGATGATACCATCATACAAAAAATGTTCACAAAATGCAAGCGTCTCGAGACAGCACATCGCGAACGAGCCAATGAAAATTGGGAGTATTTGAAAACAATTGGCATTCAAGAAAGAAAACTTCCTTCAATTGTTTCAAAATGCCCCAAAATTCTTGTACTTGGCCTTAATGAGAAGATTGTTCCAATGGTTGAATGTCTCAACACACTTGCAACTAAGCCTCATGAAGTTGCATCTGCTATAGCTAAGTTCCCTCAAATACTCTCTTGTAGTGTGGAAGAGAAGCTTTGTCCTCTTTTGGCATTTTTTCAAACATTAGGCGTGCCCGAAAAACAAATTGGGAAAATTTTATTGTTAAACCCTAGGCTTATTAGTTATAGCATTGAGACGAAGATGGGTGAAATTGTGAGATTTCTTGCTAGTGTTGGTCTTGATAAAGATGGAATGATTGGAAAAATTATGGTTAAGGACCCGTTTATTATGGGTTATAGTGTTGATAAAAGGCTTCGCCCTACTTCGGAGTTTTTGAAGTCGATAGGTTTGACTGAGCAGGATCTTCAGGTGTTGGCGTTGAACTTTCCGTCGATTTTGAGTAGAGATGTGGATAAGGTTTTGGTACACAATTATGATTTTTTAAAGAACTGTGGATTTCAAGGAAGACAGATAGTTGATTTGGTGGTTGGTTATCCTCCTATTTTGATCAAGAGTGTTCGGAATTCTTTGGAACCGAGGATCAAGTTTTTGGTAGATGTAATGGGGAGAGAAGTTGATGAAATTATTAATTATCCGTGCTTCTTTCGTCATGGCCTTAAGAAAAAACTAGTGTCGCGGCACAAACTCCTAAAGCAGAGGAATTTAAATTGCAGCTTGAGTGAAATGCTGGACTGTAATGAGAAGAAGTTTCACTTGAAGTTTGGCTTGTTAGAAGGACATGCCTTGAGTAACTAG 1008 0.3849 METSSGNNSSNMMWFFKDRGFDDTIIQKMFTKCKRLETAHRERANENWEYLKTIGIQERKLPSIVSKCPKILVLGLNEKIVPMVECLNTLATKPHEVASAIAKFPQILSCSVEEKLCPLLAFFQTLGVPEKQIGKILLLNPRLISYSIETKMGEIVRFLASVGLDKDGMIGKIMVKDPFIMGYSVDKRLRPTSEFLKSIGLTEQDLQVLALNFPSILSRDVDKVLVHNYDFLKNCGFQGRQIVDLVVGYPPILIKSVRNSLEPRIKFLVDVMGREVDEIINYPCFFRHGLKKKLVSRHKLLKQRNLNCSLSEMLDCNEKKFHLKFGLLEGHALSN 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g03042 335 Pfam mTERF 11 123 IPR003690 GO:0003690|GO:0006355
Mepo2g03042 335 Pfam mTERF 109 321 IPR003690 GO:0003690|GO:0006355
Mepo2g03042 335 PANTHER CGI-12 PROTEIN-RELATED 132 253 IPR003690 GO:0003690|GO:0006355
Mepo2g03042 335 FunFam transcription termination factor MTERF6, chloroplastic/mitochondrial 97 329 - -
Mepo2g03042 335 SMART mt_12 98 129 IPR003690 GO:0003690|GO:0006355
Mepo2g03042 335 SMART mt_12 243 275 IPR003690 GO:0003690|GO:0006355
Mepo2g03042 335 SMART mt_12 62 93 IPR003690 GO:0003690|GO:0006355
Mepo2g03042 335 SMART mt_12 134 165 IPR003690 GO:0003690|GO:0006355
Mepo2g03042 335 SMART mt_12 171 202 IPR003690 GO:0003690|GO:0006355
Mepo2g03042 335 SMART mt_12 27 57 IPR003690 GO:0003690|GO:0006355
Mepo2g03042 335 SMART mt_12 207 238 IPR003690 GO:0003690|GO:0006355
Mepo2g03042 335 SMART mt_12 276 307 IPR003690 GO:0003690|GO:0006355
Mepo2g03042 335 Gene3D Transcription termination factor 3, mitochondrial 87 329 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g03042 Mepo-Chr2 40064609 40066186 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mepo2g03042 mTERF 8.2e-46 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g03042 K15032 - gmx:100816929 531.946