LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo2g03002	ATGTCAAGAGGATTGAAGGTTCTATCAGCCCTTGACTCAGCAAAAACACAATACTACCATTTCAAGGCCATCATCATAGCAGGAATGGGACTTTTCACAGACTCTTATGACCTCTTCTCCATCACACTCATCACAAAGATGATAGGAAGAATATACTACTCCGACCACCAAGAAATCCGTCAAGTCAACCCGGTCGTTGTCTCAGCCCTTGTCTCCGTCGCACTCCTAGGAACCGCCTTCGGTCAGCTCCTATTCGGACGCCTCGGAGACCTAAAAGGCCGGCGCCACGTCTACGGTATCGCCTTATTATTGATGCTAACAAGCTCTCTAGCTTCTGGCTTTTCCATCTGTACAACAAAGAGAGCTTGTGTTTTACTATCTCTTGGTTTCTTCAGATTCTTCTTAGGGCTTGGAATTGGTGGTGATTATCCTTTATCTTCTACCATAATGTCTGAGTTTGCTAATAAAAGGACAAGAGGTTCTTTCATAGCTGCGGTTTTTTCTATGCAAGGGTTTGGTATTTTGGCTAGTGCAACTGTTACAATGGTGGTTTGCTCGGTATTTCGCAGCGGTTCGAAGCCGGCGACGGCTTTCGATGTGCCGCCGGAGGCTGACGTTGCATGGAGGTTGATATTGATGATTGGTTCAGTTCCAGCTGCATTGACTTATTATTGGCGTATGATGATGCCCGAAACTGCCAGGTATACAGCATTAGTGGAACAAAATGTGTTGCAAGCTGCAAAAGACATGGAGAAAGTACTAGATGTCTCAATGAGCCAAATAACAGAAGAGCATCCATTACCACCAGCCACAAATGCTGCCTACCCTCTTCTTTCAAGAGAATTCTTGTGGCGACACGGTCGTGATCTTTTCGCGTGTTCTGTTAATTGGTTTCTCTTAGACATAGTATTCTACAGCCAAGTTCTATTCCAAAGTGAAATATACAAACGATACCTCAACAAAAAAGAAGAAGAAGATGTGTATCAAGAGGCTTTCCATCTTGCAAGAATCCAAGCCATTCTTGCTGTTTGCTCTACCATTCCCGGCTACTTCTTCACCGTCTACTTCATCGATCGCGTAGGAAGAGTTAAAATCCAAATGATGGGTTTTTTCTTCATGGCAGTGTCATTTTTTGCTTTAGGGTTTCCCTATTACTCTCATTGGACCAAAGGAGAAAATCATGATGACAAAGGGTTCATGGTTATATATGGTCTTGCTTTCTTCTTTGCAAACTTTGGACCTAACACTACCACCTTTATTGTCCCAGCTGAACTCTTTCCAGCTAGGTTCAGGTCAACGTGTCATGGTATTTCTGGGGCTGTTGGTAAGGTTGGTGCAATCATTGGATCTGTTGGATTTCTTTGGGCATCACATAAAGAGAAGGAGGAAGGATATCCTAAGGGGATTGGAATGAAAGCCTCACTTATCATTCTTGGAGGGGTGTGCATAGTGGGAATGTTTGTTACTTATTTTTTCACTAAGGAAACTATGGGAAGGTCTTTGGAAGAAAATGAGGATGAGCAGTCTCATCATGCAGAAGAATATAACGATCTTTGA	1557	0.4322	MSRGLKVLSALDSAKTQYYHFKAIIIAGMGLFTDSYDLFSITLITKMIGRIYYSDHQEIRQVNPVVVSALVSVALLGTAFGQLLFGRLGDLKGRRHVYGIALLLMLTSSLASGFSICTTKRACVLLSLGFFRFFLGLGIGGDYPLSSTIMSEFANKRTRGSFIAAVFSMQGFGILASATVTMVVCSVFRSGSKPATAFDVPPEADVAWRLILMIGSVPAALTYYWRMMMPETARYTALVEQNVLQAAKDMEKVLDVSMSQITEEHPLPPATNAAYPLLSREFLWRHGRDLFACSVNWFLLDIVFYSQVLFQSEIYKRYLNKKEEEDVYQEAFHLARIQAILAVCSTIPGYFFTVYFIDRVGRVKIQMMGFFFMAVSFFALGFPYYSHWTKGENHDDKGFMVIYGLAFFFANFGPNTTTFIVPAELFPARFRSTCHGISGAVGKVGAIIGSVGFLWASHKEKEEGYPKGIGMKASLIILGGVCIVGMFVTYFFTKETMGRSLEENEDEQSHHAEEYNDL	518

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo2g03002	518	SUPERFAMILY	MFS general substrate transporter	11	507	IPR036259	-
	Mepo2g03002	518	CDD	MFS_PhT	24	496	-	-
	Mepo2g03002	518	ProSiteProfiles	Major facilitator superfamily (MFS) profile.	23	497	IPR020846	GO:0022857
	Mepo2g03002	518	Pfam	Sugar (and other) transporter	25	504	IPR005828	GO:0016020\|GO:0022857\|GO:0055085
	Mepo2g03002	518	FunFam	Inorganic phosphate transporter 1-6	19	518	-	-
	Mepo2g03002	518	ProSitePatterns	Sugar transport proteins signature 2.	134	159	IPR005829	GO:0016020\|GO:0022857\|GO:0055085
	Mepo2g03002	518	Gene3D	MFS general substrate transporter like domains	19	518	IPR036259	-
	Mepo2g03002	518	PANTHER	SOLUTE CARRIER FAMILY 22 MEMBER	21	503	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Mepo2g03002	Mepo-Chr2	39715437	39719513	Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mepo2g03002	5	507	Inorganic Solute Cotransporters	AT1G76430	63.689	0.0	669

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo2g03002	K08176		-	gmx:100797683	790.415

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