Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g02986 ATGAAAGAAGGTGGAAACAAGAAGCAAGGTGCAGCCTCACCATGTGCTGCATGCAAGCTTCTCAGAAGAAGGTGTGCTCAAGATTGTCTCTTTGCTCCTTACTTCCCTGCTGATGAGCCTCACAAGTTTGCTAATGTTCACAAAGTCTTTGGTGCTAGCAATGTCAACAAGATGCTTCAGGACTTACCTGAGCATCAAAGAGGGGATGCAGTGAGTAGCATGGTGTATGAAGCTAATGCAAGAGTAAGAGACCCTGTGTATGGTTGTGTAGGGGCAATTTCGTCCCTTCAGCAACAGATTGATGTGCTACAAACCCAATTGGCTGTGGCACAAGCTGAGGCAGTGCACCTAAGGGTGCGCCAAACAGCATCATCATTTTGGAACAGTGCAGGACATAGTCCAACTAGCCCAACCTATAGTGGCTCTCCATCATCAAAAATCAATGAATCACAACAAGCCAAACATATTTTTGATATGGACATGGTGGTGGACCAAGCTGCCTATGGTGATTCAATGTGGTGA 522 0.4598 MKEGGNKKQGAASPCAACKLLRRRCAQDCLFAPYFPADEPHKFANVHKVFGASNVNKMLQDLPEHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLAVAQAEAVHLRVRQTASSFWNSAGHSPTSPTYSGSPSSKINESQQAKHIFDMDMVVDQAAYGDSMW 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g02986 173 Pfam Lateral organ boundaries (LOB) domain 14 111 IPR004883 -
Mepo2g02986 173 Coils Coil 93 113 - -
Mepo2g02986 173 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 11 144 - -
Mepo2g02986 173 MobiDBLite consensus disorder prediction 127 150 - -
Mepo2g02986 173 ProSiteProfiles LOB domain profile. 13 114 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g02986 Mepo-Chr2 39519810 39524400 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g02986 1 173 AS2 family AT1G31320 75.145 2.26e-74 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mepo2g02986 LOB 1.6e-43 No_clan