Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g02980 ATGCAAACGGATGGAATTGAACCGCTTTCAGGAGAGCCATACTTTCATGTGGTCCTTTCGAAAACACATCTTAGTCCCCGCTTTCATATGGGGCCAAGCAGCAGCATATGTGAAGAACTTCCTTCTAAATCGGTTCCGACTATTCTCAAATATCGGGGTAAGAGTTGGAGCACGACTTATAATGGGCAGAACAAAACCAAACTGTTTAATAGTGTTAGCTGGGAAAAATTTGCTGAAGATAATTATTTGAAGCTTGGAGACGCTTGTGTTTTTGAGCTCATGAAAAACAGCGTAGAGAAAATCGTCTTCAAAGTTCAAATTCTTAGAGGTGAAGAAGAGCCAATTTTGCTATCCGAATTTCCTGGAACCGGTGAGAGGGATGCGCCATTTGTCATAGATTAG 402 0.4154 MQTDGIEPLSGEPYFHVVLSKTHLSPRFHMGPSSSICEELPSKSVPTILKYRGKSWSTTYNGQNKTKLFNSVSWEKFAEDNYLKLGDACVFELMKNSVEKIVFKVQILRGEEEPILLSEFPGTGERDAPFVID 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g02980 133 SUPERFAMILY DNA-binding pseudobarrel domain 11 109 IPR015300 -
Mepo2g02980 133 Gene3D - 6 112 IPR015300 -
Mepo2g02980 133 Pfam B3 DNA binding domain 47 105 IPR003340 GO:0003677
Mepo2g02980 133 ProSiteProfiles B3 DNA-binding domain profile. 47 111 IPR003340 GO:0003677
Mepo2g02980 133 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 12 113 IPR044837 -
Mepo2g02980 133 CDD B3_DNA 13 109 IPR003340 GO:0003677
Mepo2g02980 133 SMART B3_2 15 111 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g02980 Mepo-Chr2 39469608 39472932 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g02980 71 112 REM Transcription Factor Family AT4G33280 45.238 2.80e-06 43.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mepo2g02980 B3 1.7e-09 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g02980 - - mtr:11441927 231.491