Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g02912 ATGGCAACAACAACACCAGAAGAAGAAGAGTACATGCAAAACCTCAGATCCAAAGCAACAGAACTTTTCATCAGAGAAGAATGGACCAATGCCATTGAAACCTATTCCCATTTCATTTCTCTTTGCACCCACCATCTTTCTCTTCCACACCCCAACCCACTTCACCATCAAAAGCTTCATAAATCACTCTGCATTTCCCTCTGCAACCGGGCCGAAGCAAAATCAAAACTCCGCGAATTCAACTCGGCGTTACAAGACTGTGATCATGCTCTACAAATTGATGCAACACATTTCAAGAGTCTTGTTTGTAAAGGTAAGATTTTGCTCTGTCTTAATAGATATTCTATGGCTTTAAATTGCTTCAAAACAGCTATGCTTGATAATCAGGCAAGTGGGAACTGTGAAATGCTTGTTGGGTTTGTTGAAAAATGTAAAAAGTTTGAATTTTTATCGAGGAGTGGAACGATGGATCTTTCTGATTGGGTTTTGAATGGGTTTCCTGGTAAGGCTCCTGAGCTTGCTGAATTTATTGGTGCTGTTGAGATTAGAAAATCGGAGATTAGTGGGCGGGGGGTTTTCGCTACGAAGAATGTTGATGCTGGGTCTTTGATTTTGGTTACTAAGGCGGTTGCGATGGAGAGGAGTATTTTGGGAGGTAAAGATTTGAGTGAGGATACTCAATTAGTTATGTGGAAGAATTTTATTGATAAAGTTGTTGATTTTGTTAAAAAGTGTCACAAGACTAGGAATTTGATTGGTAAATTGTCAATTGGGGAAAATGAGGATGAACTTGATGTACCTGATGTTGATCTGTTTAGGCCTGAGAATGTTGGTGAGGTGAATTCAAACGAGGATGTTGAGATTGATATGGTTAAGTTGTTGGCTATATTGGATGTTAATTCTCTCACTGAGGATGCAGTTTCAGCTAATGTTTTGAGGAAGAACAATGATTGTTATGGTGTTGGGTTATGGTTGCTTCCTTCATTCATCAATCATTCGTGTTGTCCTAATGCGAGGCGGTTGCATGTTGGGGATTATTTGATTGTTCATGCTTCAAGAGATTTGAAAGCTGGTGAAGAGATAACTTTTGCTTATCTTGATCCACTTTCTCCCTTGAACAAGAGAAAAGAATTGTCTGTGACATGGGGGATTCATTGCAAGTGCAAGAGGTGCAAGTCTGAGGGGGAATTCTTGTTCTTGAAGCAAGAGGTGAAGGAGATTGAGATTGGTATTGAAAGAGGGATGGATGTAGGTGGTTTGGTGTATAAGCTTGAGGAACAAATGAAGAGATGGAAGGTTAGGGGGAAAGAGAAGGGATACTTGAGGGCTTCATTTTGGTCTTTATATTCAGAGGCTTATGGTTCGGAGAGGTGTATGAAAAGATGGGGAAGGAGAATTCCAGCATTGGATGCTGTGGTTGATAGCATTACAGATGTAGTGGGAGGTGATCATAGGGTGCTTAAGATTCTGATGGAGGAATTGAAGAGAAAAGGCAGTGGTAGTGGTGGTGGAAATTTGGAGATGGAGAAAGTTTTCAAGTTAGCAAGAGAAGTGTATGGGAAGGTAGTGAAAAAACAAGCAATGAGGACACTGCTTGAGCTTTGCATTGCTGCTGAATGA 1620 0.4056 MATTTPEEEEYMQNLRSKATELFIREEWTNAIETYSHFISLCTHHLSLPHPNPLHHQKLHKSLCISLCNRAEAKSKLREFNSALQDCDHALQIDATHFKSLVCKGKILLCLNRYSMALNCFKTAMLDNQASGNCEMLVGFVEKCKKFEFLSRSGTMDLSDWVLNGFPGKAPELAEFIGAVEIRKSEISGRGVFATKNVDAGSLILVTKAVAMERSILGGKDLSEDTQLVMWKNFIDKVVDFVKKCHKTRNLIGKLSIGENEDELDVPDVDLFRPENVGEVNSNEDVEIDMVKLLAILDVNSLTEDAVSANVLRKNNDCYGVGLWLLPSFINHSCCPNARRLHVGDYLIVHASRDLKAGEEITFAYLDPLSPLNKRKELSVTWGIHCKCKRCKSEGEFLFLKQEVKEIEIGIERGMDVGGLVYKLEEQMKRWKVRGKEKGYLRASFWSLYSEAYGSERCMKRWGRRIPALDAVVDSITDVVGGDHRVLKILMEELKRKGSGSGGGNLEMEKVFKLAREVYGKVVKKQAMRTLLELCIAAE 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g02912 539 ProSiteProfiles SET domain profile. 178 366 IPR001214 GO:0005515
Mepo2g02912 539 SUPERFAMILY TPR-like 10 129 IPR011990 GO:0005515
Mepo2g02912 539 SUPERFAMILY SET domain 180 392 IPR046341 -
Mepo2g02912 539 Gene3D SET domain 281 396 IPR046341 -
Mepo2g02912 539 Pfam SET domain 189 365 IPR001214 GO:0005515
Mepo2g02912 539 Gene3D Tetratricopeptide repeat domain 2 138 IPR011990 GO:0005515
Mepo2g02912 539 SMART set_7 178 372 IPR001214 GO:0005515
Mepo2g02912 539 SMART tpr_5 98 131 IPR019734 GO:0005515
Mepo2g02912 539 SMART tpr_5 64 97 IPR019734 GO:0005515
Mepo2g02912 539 CDD SET_SMYD 294 391 - -
Mepo2g02912 539 PANTHER TPR DOMAIN PROTEIN (AFU_ORTHOLOGUE AFUA_5G12710) 3 534 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g02912 Mepo-Chr2 38901769 38903618 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mepo2g02912 SET 2e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g02912 - - mtr:11446296 1056.97