Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g02904 ATGGCTTTCATTGGCTTGGTTATGGTGTGTTCTCTTACCATGTTCTCCTCTGTTAATGCCTATGGTGAAGGATGGACTAATGCACATGCCACCTTCTATGGAGGAAGTGATGCATCAGGAACAATGGGTGGGGCTTGTGGATATGGTAACCTATACAGTCAAGGTTATGGAACAAACACTGCTGCTTTGAGTACAGCACTTTTCAACAATGGTTTAAGCTGTGGCTCTTGCTATGAAATTAGGTGTGCTAATGACCATAGATGGTGCCTTCCTGGTTCCATTGTGGTCACTGCCACAAATTTCTGTCCACCAAACAATGCCTTACCAAACAATGATGGTGGTTGGTGTAACCCTCCTCTCCAACATTTTGATCTTGCTCAACCTGTTTTTCTTCGTATTGCTCAATACAAAGCTGGAATTGTTCCTGTAGATTTTAGAAGGGTATCATGCAGAAGAAAGGGAGGTATAAGGTTCACTATAAATGGACATTCTTACTTTAACCTAGTTCTCATCACAAACGTTGGTGGTGCTGGAGATGTACATGCTGCATCCATCAAAGGGTCAAAAACTGGTTGGATATCTATGTCAAGAAACTGGGGACAAAACTGGCAGAGCAACAATTATCTCAATGGTCAAAGTTTGTCTTTTAAGGTTACAACTAGTGATGGTCGTACTGTTGTTTCCAATAATGTTGCTCCAGCTGGATGGTCTTTTGGTCAAACCTACACTGGTGCTCAAATCCTCTAG 747 0.4217 MAFIGLVMVCSLTMFSSVNAYGEGWTNAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIRCANDHRWCLPGSIVVTATNFCPPNNALPNNDGGWCNPPLQHFDLAQPVFLRIAQYKAGIVPVDFRRVSCRRKGGIRFTINGHSYFNLVLITNVGGAGDVHAASIKGSKTGWISMSRNWGQNWQSNNYLNGQSLSFKVTTSDGRTVVSNNVAPAGWSFGQTYTGAQIL 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g02904 248 PRINTS Expansin signature 55 69 IPR002963 GO:0009664
Mepo2g02904 248 PRINTS Expansin signature 94 104 IPR002963 GO:0009664
Mepo2g02904 248 PRINTS Expansin signature 230 246 IPR002963 GO:0009664
Mepo2g02904 248 PRINTS Expansin signature 82 93 IPR002963 GO:0009664
Mepo2g02904 248 PRINTS Expansin signature 154 166 IPR002963 GO:0009664
Mepo2g02904 248 PRINTS Expansin signature 113 130 IPR002963 GO:0009664
Mepo2g02904 248 PRINTS Expansin signature 166 187 IPR002963 GO:0009664
Mepo2g02904 248 PRINTS Expansin signature 130 143 IPR002963 GO:0009664
Mepo2g02904 248 PRINTS Expansin signature 201 222 IPR002963 GO:0009664
Mepo2g02904 248 SUPERFAMILY PHL pollen allergen 152 244 IPR036749 -
Mepo2g02904 248 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 43 155 IPR007112 -
Mepo2g02904 248 CDD DPBB_EXPA_N 24 150 - -
Mepo2g02904 248 FunFam Expansin 15 151 - -
Mepo2g02904 248 SMART dpbb_1 60 145 IPR007112 -
Mepo2g02904 248 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 165 244 IPR007117 -
Mepo2g02904 248 Pfam Expansin C-terminal domain 156 233 IPR007117 -
Mepo2g02904 248 PANTHER EXPANSIN-A15 7 246 IPR002963 GO:0009664
Mepo2g02904 248 Pfam Lytic transglycolase 60 144 IPR009009 -
Mepo2g02904 248 Gene3D - 155 247 IPR036749 -
Mepo2g02904 248 SUPERFAMILY Barwin-like endoglucanases 10 173 IPR036908 -
Mepo2g02904 248 FunFam Expansin 155 247 - -
Mepo2g02904 248 Gene3D - 11 151 IPR036908 -
Mepo2g02904 248 PRINTS Expansin/Lol pI family signature 24 39 IPR007118 GO:0005576
Mepo2g02904 248 PRINTS Expansin/Lol pI family signature 230 244 IPR007118 GO:0005576
Mepo2g02904 248 PRINTS Expansin/Lol pI family signature 64 82 IPR007118 GO:0005576
Mepo2g02904 248 PRINTS Expansin/Lol pI family signature 42 60 IPR007118 GO:0005576
Mepo2g02904 248 PRINTS Expansin/Lol pI family signature 138 154 IPR007118 GO:0005576
Mepo2g02904 248 PRINTS Expansin/Lol pI family signature 192 206 IPR007118 GO:0005576
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g02904 Mepo-Chr2 38841395 38843081 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g02904 1 247 Expansin Gene Family AT2G03090 78.543 6.13e-150 416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g02904 - - gmx:100776066 488.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g02904 2 38841395 38843081 Mepo2g02904 2 38841395 38843081 ECH
Mepo2g02904 2 38841395 38843081 Mepo5g03184 5 38991157 38993833 ECH