Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g02903 ATGGCCATGACCTTAGATGATGATCAATGGATTGATGAGTTTTTCATGTGTGATAATTCAAATGAGAACAAAGAGCCATTAGACATTGAATCAATGAGCCAAAATGTAGAAAAGGAAGAAGAAACCCTCGTGAATAAGAAGCAATGTCATGGAGGGGATGCGAGTAAAAGTGGGAATTTTAATGTTAAAAATGATAAGGGGAAAGATAGAAATTGTCGCATTTCTAGTAATGAAAAACATGCACTTGCTGAGAGAGAAAGGAGGAAAAAAATGAAGAGCATGTTAGATAGCCTTCAGGATTTGATTCCTCATCTTACTTACAAGGTAGATTCTGTAACCATTGTGGTTGAAGCAGTGAAGCGCATAAAATATCTAAAACAAACTCTAGAAAAGCTGGAAAAGCAGAAAAAAGAAATGCTTAAATCATTTAGTGAAGCATTCACTGCTGATCAGCGATCTTTTAGTTTGAACTCGCAGATGGTAACTTCAAATGCACTAGCTTTTCAACAAATGTGGTTTTCTCAAAATGTTACCTTTAACATTTGTGGAGATGAAGCACAATTTTGCATATACACAACTAAGAAGCCAAGCTTGTTGACAAGAATATTTTATGTGATGGAGAAACATAAGATTGATGTCATACATGCCAACATCTTAAGCAATGATAATGGAAACAGCTGCATGATCCAAGCCCATGTTTTCTTCTTTGGTCTCAATGTTGACGGAAATCAACGAGAAACTTTGATGTCAATGAACATGGGATTGCTTTCGATCATGGATCTTTATTTAAGAAAGGTGAAACGAGCTACACATGAAAGCCAAAATGCAATTTCAGTGGAGGAAAGTTACAAGCTAGCAGCAGGAGAAATTGTGGATCTTTTAAAATTTTGA 891 0.3569 MAMTLDDDQWIDEFFMCDNSNENKEPLDIESMSQNVEKEEETLVNKKQCHGGDASKSGNFNVKNDKGKDRNCRISSNEKHALAERERRKKMKSMLDSLQDLIPHLTYKVDSVTIVVEAVKRIKYLKQTLEKLEKQKKEMLKSFSEAFTADQRSFSLNSQMVTSNALAFQQMWFSQNVTFNICGDEAQFCIYTTKKPSLLTRIFYVMEKHKIDVIHANILSNDNGNSCMIQAHVFFFGLNVDGNQRETLMSMNMGLLSIMDLYLRKVKRATHESQNAISVEESYKLAAGEIVDLLKF 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g02903 296 CDD bHLH_AtbHLH_like 80 133 IPR045239 -
Mepo2g02903 296 Pfam Helix-loop-helix DNA-binding domain 78 126 IPR011598 GO:0046983
Mepo2g02903 296 Gene3D - 73 148 IPR036638 GO:0046983
Mepo2g02903 296 PANTHER BHLH DOMAIN-CONTAINING PROTEIN 30 290 IPR044278 GO:0003700|GO:0006355|GO:0009960
Mepo2g02903 296 MobiDBLite consensus disorder prediction 47 67 - -
Mepo2g02903 296 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 75 125 IPR011598 GO:0046983
Mepo2g02903 296 SMART finulus 81 131 IPR011598 GO:0046983
Mepo2g02903 296 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 78 142 IPR036638 GO:0046983
Mepo2g02903 296 Coils Coil 115 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g02903 Mepo-Chr2 38827054 38830105 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g02903 66 233 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G49770 33.482 4.24e-23 95.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mepo2g02903 HLH 3.4e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g02903 - - gmx:102665879 161.77