Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g02890 ATGGCTGCTTTGACGATGAGAGCTGCTGCAGCGGCGGCGGTGCCCCGCAGTTTCTGCCGACTCTTTTGCACTAATCCAGCTTTCCCTTCTTTCTCTTCATCGCCGCCTTCTGGACCGCCGCCTTCCGCTCGACAGATGGCCGAGCCTAGCACCAACCTCTTCGTCTCTGGGCTTAGTAAACGTACTACAACAGAGACGCTGAGGGAAGCATTCCAAAAGTTCGGTGAAGTTGTTCATGCAAGGGTGGTAACAGATCGAGTCTCAGGTTACTCTAAGGGATTTGGTTTCGTGAAATATGCTACTTTAGAAGATGCTGCTAAGGGCATTGAAGGAATGGATGGCAAGTTTTTGGAGGGCTGGGTTATATTTGCAGAGTATGCAAGACCAAGACCACCACCCGGAGAAGCTGTAAATAATACGGGCCGACCTTATTAA 435 0.5057 MAALTMRAAAAAAVPRSFCRLFCTNPAFPSFSSSPPSGPPPSARQMAEPSTNLFVSGLSKRTTTETLREAFQKFGEVVHARVVTDRVSGYSKGFGFVKYATLEDAAKGIEGMDGKFLEGWVIFAEYARPRPPPGEAVNNTGRPY 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g02890 144 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 51 129 IPR000504 GO:0003723
Mepo2g02890 144 SMART rrm1_1 52 125 IPR000504 GO:0003723
Mepo2g02890 144 PANTHER NUCLEOLAR PROTEIN 8 31 133 - -
Mepo2g02890 144 Gene3D - 30 137 IPR012677 -
Mepo2g02890 144 SUPERFAMILY RNA-binding domain, RBD 38 139 IPR035979 GO:0003676
Mepo2g02890 144 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 53 119 IPR000504 GO:0003723
Mepo2g02890 144 FunFam RNA recognition motif-containing protein 31 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g02890 Mepo-Chr2 38644062 38646948 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g02890 52 128 Eukaryotic Initiation Factors Gene Family AT2G23350 36.364 1.73e-09 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g02890 - - psat:127105180 213.386
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g02890 2 38644062 38646948 Mepo2g02890 2 38644062 38646948 ECH